Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.122-201ENST00000363331 96 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNU6-746P-201ENST00000384112 109 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNU6-662P-201ENST00000384253 104 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNU6-19P-201ENST00000384718 107 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 PCNPP3-201ENST00000393579 471 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNU4-30P-201ENST00000410245 143 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.595-201ENST00000410403 105 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RPL23AP36-201ENST00000413895 458 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC096649.2-201ENST00000416186 393 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AL035423.1-201ENST00000420331 213 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC007215.1-201ENST00000464893 276 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 MIR4282-201ENST00000583613 67 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC005000.2-201ENST00000605468 310 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 RNU6-91P-201ENST00000607774 107 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AL109809.4-201ENST00000603520 2185 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC008725.1-201ENST00000605123 2263 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 UBE2WP1-201ENST00000362030 340 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.136-201ENST00000363444 102 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 RNU6-961P-201ENST00000363893 105 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 SNORA36A-201ENST00000384221 132 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 RNVU1-14-201ENST00000384770 164 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC112220.1-201ENST00000434628 355 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AL714022.1-201ENST00000439897 151 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AP000705.1-201ENST00000454567 350 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 SNORA40.9-201ENST00000515895 93 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 SNORA25.14-201ENST00000516481 132 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 RNU6-1212P-201ENST00000517023 104 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AP002392.1-201ENST00000537692 208 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC233702.2-202ENST00000562547 291 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC105137.2-201ENST00000569073 466 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC008749.1-201ENST00000597650 306 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC010999.1-201ENST00000611856 324 ntBASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
UPK3BL1B0FP48 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.84□□□□□ -1.8
UPK3BL1B0FP48 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.84□□□□□ -1.8
UPK3BL1B0FP48 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC010680.1-201ENST00000590024 3590 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 MIR410-201ENST00000362222 80 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 SNORA25.1-201ENST00000362326 128 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RNU6-545P-201ENST00000362681 104 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 Y_RNA.275-201ENST00000364726 110 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RNU6-740P-201ENST00000364734 105 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RNU6-1175P-201ENST00000365200 107 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 MIR487A-201ENST00000385009 80 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 Y_RNA.626-201ENST00000411288 95 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 CYCSP48-201ENST00000417124 323 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC007395.1-201ENST00000451333 677 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC025445.1-201ENST00000502728 300 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC074133.1-201ENST00000515696 183 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RN7SKP18-201ENST00000516005 275 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 AL356575.1-201ENST00000603008 283 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 uc_338.32-201ENST00000615087 172 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RBBP8P1-201ENST00000449447 1844 ntBASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UPK3BL1B0FP48 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK3BL1B0FP48 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms