Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 MIR1244-1-201ENST00000612829 85 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 MIR1244-3-201ENST00000635744 85 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 MIR1244-2-201ENST00000636449 85 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 MIR1244-4-202ENST00000636813 85 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 AL109809.4-201ENST00000603520 2185 ntBASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC85CA6NKD9 RPS26P42-201ENST00000413485 326 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC092423.1-201ENST00000430165 186 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 MTCO3P29-201ENST00000432119 779 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 HLA-N-201ENST00000437516 135 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC105272.1-201ENST00000438604 198 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 GPM6BP3-201ENST00000442797 145 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AP001324.2-201ENST00000461163 319 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 RPL30P12-201ENST00000474666 353 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.721-201ENST00000517207 102 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 VN1R91P-201ENST00000594377 169 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC016727.2-201ENST00000603988 621 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 AC007496.3-201ENST00000624987 3443 ntBASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC85CA6NKD9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 SNORD114-19-201ENST00000363072 75 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 RNA5SP99-201ENST00000364020 114 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 RNU1-101P-201ENST00000391171 127 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC113618.1-201ENST00000416747 285 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 Z82188.1-201ENST00000436709 154 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC009296.1-201ENST00000443146 155 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AL353752.1-201ENST00000454946 260 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 PPBPP1-201ENST00000510807 373 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.706-201ENST00000516933 99 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC090877.1-201ENST00000561418 344 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 MIR3136-201ENST00000583498 78 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 KLKP1-201ENST00000595979 403 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC104695.3-201ENST00000604052 296 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AL162373.1-201ENST00000620433 407 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC110774.1-201ENST00000623567 2018 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 AC099654.7-201ENST00000635788 2127 ntBASIC3.73□□□□□ -1.81
CCDC85CA6NKD9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 SNORA71.1-201ENST00000364523 117 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.269-201ENST00000364685 89 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.455-201ENST00000384230 98 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 SNORA69.1-201ENST00000390904 137 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 Y_RNA.592-201ENST00000410274 109 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 RNU6-1140P-201ENST00000410517 106 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC087477.1-201ENST00000465747 340 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 RNU6-764P-201ENST00000516396 105 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 MIR2355-201ENST00000517199 87 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC022616.4-201ENST00000522985 181 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC007375.1-201ENST00000554513 578 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 MIR5188-201ENST00000583467 113 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC008737.2-201ENST00000599446 118 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AL359198.2-201ENST00000611836 194 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 AC103858.2-201ENST00000621471 543 ntBASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC85CA6NKD9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC85CA6NKD9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC85CA6NKD9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 RNU6-137P-201ENST00000363680 108 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AIMP1P2-201ENST00000425294 312 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AL591806.2-201ENST00000433122 173 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AL135938.1-201ENST00000443141 297 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 SNORA31.6-201ENST00000516241 130 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 RNU6-567P-201ENST00000516746 107 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AP002770.2-201ENST00000543613 532 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 U2.1-201ENST00000618978 145 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 MIR7154-201ENST00000620673 73 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 AC002064.3-201ENST00000623448 346 ntBASIC3.71□□□□□ -1.82
CCDC85CA6NKD9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC85CA6NKD9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms