Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Z83818.1-201ENST00000603584 150 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AC136443.5-201ENST00000603741 370 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 MIR15A-201ENST00000607334 83 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 AL354696.1-201ENST00000614652 497 ntBASIC0.15□□□□□ -2.39
TCRBV3S1A0A5B6 SNORA32.2-201ENST00000384049 122 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-1235P-201ENST00000384559 107 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 MIR1305-201ENST00000408300 86 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 FO393414.1-201ENST00000428697 1184 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AP000542.1-201ENST00000448473 371 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 NDUFB1P2-201ENST00000449477 176 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-498P-201ENST00000459468 107 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC104982.1-201ENST00000478775 574 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 SUMO2P5-201ENST00000506790 245 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-1041P-201ENST00000516254 102 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RN7SKP12-201ENST00000516275 143 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 Y_RNA.687-201ENST00000516558 91 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 DEFB108A-201ENST00000530110 222 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 MIR3146-201ENST00000580367 79 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AL031281.1-201ENST00000604049 488 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 CTHRC1P1-201ENST00000605383 469 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC069545.1-201ENST00000605671 358 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC092106.3-201ENST00000611308 722 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 AC008147.4-201ENST00000617570 1204 ntBASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-534P-201ENST00000364877 106 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 SMIM11P1-201ENST00000369586 178 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL359704.1-201ENST00000411586 781 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC092809.3-201ENST00000415453 231 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 RNU7-21P-201ENST00000459430 62 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC010531.2-201ENST00000465012 153 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC105758.1-201ENST00000506038 399 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC067942.3-201ENST00000512025 362 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC011979.2-201ENST00000527568 352 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL136520.1-202ENST00000555494 763 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL132657.2-201ENST00000564417 358 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL513534.2-201ENST00000603836 250 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL138889.2-201ENST00000603883 242 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC016727.2-201ENST00000603988 621 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL022154.1-201ENST00000604698 785 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC104073.3-201ENST00000610942 955 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC243829.3-201ENST00000622177 108 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AL138955.1-201ENST00000622881 1040 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 SNORD3E-202ENST00000627253 216 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 AC099654.8-201ENST00000637757 681 ntBASIC0.13□□□□□ -2.39
TCRBV3S1A0A5B6 MIR412-201ENST00000362142 91 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-1285P-201ENST00000363480 105 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-438P-201ENST00000365561 103 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-207P-201ENST00000384137 107 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 MIR10A-201ENST00000385043 110 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 UBE2V1P15-201ENST00000407776 448 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC233266.1-201ENST00000454518 96 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 RNU7-34P-201ENST00000459394 64 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC119751.4-201ENST00000507498 357 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC108729.3-201ENST00000513484 108 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-496P-201ENST00000516145 99 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC023050.2-201ENST00000544968 387 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC090888.2-201ENST00000559765 1144 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC026741.1-201ENST00000605892 482 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC092354.1-201ENST00000606057 376 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC242852.1-201ENST00000612151 96 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC131159.1-201ENST00000621854 213 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC244015.1-201ENST00000622301 99 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 AC097460.3-201ENST00000623099 442 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 SCARNA4-202ENST00000625402 129 ntBASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TCRBV3S1A0A5B6 MTND5P16-201ENST00000460269 1703 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 MIR337-201ENST00000362281 93 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 SNORD99-201ENST00000408612 74 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC060773.1-201ENST00000421698 310 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AL953862.1-201ENST00000423016 168 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 MTND4P20-201ENST00000424125 869 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 MTCO2P1-201ENST00000424648 477 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AL031313.1-201ENST00000448435 256 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC016925.1-201ENST00000458303 298 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 MTCO3P9-201ENST00000506989 781 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-922P-201ENST00000516753 99 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC080078.2-201ENST00000603766 501 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC012557.2-201ENST00000605919 418 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 AC124016.2-201ENST00000610058 665 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms