Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CKS1BP2-201ENST00000497342 240 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AP001893.2-201ENST00000526949 202 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 PSMA3P-201ENST00000555485 635 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC004908.3-201ENST00000610248 625 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 AC124864.2-201ENST00000624736 186 ntBASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMIM28A0A1B0GU29 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 SNORA69-201ENST00000383895 132 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.480-201ENST00000384364 102 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 RNA5SP219-201ENST00000390940 113 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AL606923.1-201ENST00000406616 190 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 RNA5SP390-201ENST00000410191 113 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AC012308.1-201ENST00000451232 178 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AL353752.1-201ENST00000454946 260 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AC019235.1-201ENST00000503847 207 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 RNU7-193P-201ENST00000516723 65 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 SNORA48.11-201ENST00000517015 89 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 IMMP1LP2-201ENST00000552954 492 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AC022202.1-201ENST00000613515 211 ntBASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.85□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-655P-201ENST00000362858 107 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.372-201ENST00000365599 102 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-692P-201ENST00000384496 107 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 SNORA17.3-201ENST00000391159 129 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 RNU6-648P-201ENST00000410190 107 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 RNU2-63P-201ENST00000410792 194 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL121601.2-201ENST00000438019 707 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL161788.1-201ENST00000441805 169 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC243964.1-201ENST00000441814 261 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 PSPHP1-201ENST00000450062 261 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 Y_RNA.638-201ENST00000459374 113 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC107401.1-201ENST00000503426 685 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC109329.1-201ENST00000518744 317 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC118273.2-201ENST00000532092 465 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 OR11H5P-201ENST00000554039 926 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AC091135.1-201ENST00000585943 307 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 VN1R80P-201ENST00000597126 338 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL136363.2-201ENST00000604173 851 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 AL355297.2-201ENST00000604792 129 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 BNIP3P10-201ENST00000605360 577 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 U2.17-201ENST00000611454 95 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 MIR5739-201ENST00000619803 80 ntBASIC1.84□□□□□ -2.11
SMIM28A0A1B0GU29 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SMIM28A0A1B0GU29 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AL596028.1-201ENST00000326971 197 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.167-201ENST00000363735 109 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1210P-201ENST00000363775 107 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-944P-201ENST00000364023 107 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 U3.13-201ENST00000364804 214 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-827P-201ENST00000365553 106 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.378-201ENST00000365652 113 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-38P-201ENST00000384085 107 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.517-201ENST00000384551 106 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 SNORD73A-201ENST00000386062 65 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AL603825.1-201ENST00000438481 80 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AL031274.1-201ENST00000450334 232 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-333P-201ENST00000459117 107 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 MTCO3P38-201ENST00000468910 766 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.693-201ENST00000516641 110 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Y_RNA.704-201ENST00000516851 102 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 MTND4P7-201ENST00000523876 130 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC103996.1-201ENST00000555468 102 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC233702.2-202ENST00000562547 291 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC104581.2-201ENST00000572227 430 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 Z82243.1-201ENST00000609432 473 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 AC090517.3-201ENST00000625170 141 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 MTND4P14-201ENST00000435799 1354 ntBASIC1.83□□□□□ -2.12
SMIM28A0A1B0GU29 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 snoU2_19.1-201ENST00000362361 80 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-527P-201ENST00000363425 104 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 RNU6-1322P-201ENST00000364309 107 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 MIR544A-201ENST00000384855 91 ntBASIC1.82□□□□□ -2.12
SMIM28A0A1B0GU29 C8orf59P1-201ENST00000429930 303 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms