Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL117342.1-201ENST00000404861 406 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 COX6CP10-201ENST00000416832 224 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 ARL5AP1-201ENST00000418991 388 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 MTCO3P29-201ENST00000432119 779 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AC073910.1-201ENST00000445047 438 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 Y_RNA.638-201ENST00000459374 113 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 CYP4A27P-201ENST00000567218 190 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 KC877982.1-201ENST00000602313 470 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AL596327.1-201ENST00000603629 213 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AL034555.1-201ENST00000604816 211 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 U6.42-201ENST00000618440 107 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 FRG1KP-201ENST00000623592 341 ntBASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAV27A0A087WT01 RNU6-462P-201ENST00000362659 105 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RNU6-511P-201ENST00000363496 107 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 SNORD114-24-201ENST00000365029 72 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 SNORA32.2-201ENST00000384049 122 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RNU6-1179P-201ENST00000384667 107 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RPS26P5-201ENST00000418544 335 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 USP9YP14-201ENST00000430663 563 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 RPL23AP30-201ENST00000432419 501 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC090142.3-201ENST00000519012 385 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC110760.3-201ENST00000598794 467 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC174048.1-201ENST00000603389 144 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC084824.5-201ENST00000612009 413 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC131159.1-201ENST00000621854 213 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 AC068700.1-201ENST00000565862 3754 ntBASIC0.44□□□□□ -2.34
TRAV27A0A087WT01 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RNU6-78P-201ENST00000362897 107 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 Y_RNA.124-201ENST00000363339 93 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RNU6-910P-201ENST00000390844 107 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RPS3AP37-201ENST00000419176 745 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RNU7-34P-201ENST00000459394 64 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 MTND3P5-201ENST00000512798 333 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 SNORA31.2-201ENST00000516019 134 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RNU6-1041P-201ENST00000516254 102 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 RN7SKP49-201ENST00000516675 260 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 MIR4709-201ENST00000577272 72 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 MIR548AC-201ENST00000585049 88 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AC008507.2-201ENST00000588402 1176 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 BCRP9-201ENST00000605312 388 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AL512506.1-201ENST00000613918 449 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AL512427.1-201ENST00000618593 349 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AC026585.1-201ENST00000619582 524 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AL138955.1-201ENST00000622881 1040 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 AC097372.5-201ENST00000623665 376 ntBASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV27A0A087WT01 Y_RNA.191-201ENST00000363972 113 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 Y_RNA.192-201ENST00000363977 102 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RNU6-560P-201ENST00000364007 108 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RNU6-769P-201ENST00000384407 104 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RNU4-22P-201ENST00000411058 166 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RPS3AP1-201ENST00000413190 320 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC002429.1-201ENST00000437672 148 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RPS27P22-201ENST00000478056 241 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC079395.1-201ENST00000510981 262 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 FABP5P5-201ENST00000515537 406 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RNA5SP216-201ENST00000516111 123 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 MIR544B-201ENST00000582372 78 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 MIR3124-201ENST00000582636 67 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC108747.1-201ENST00000609508 535 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 MIR8070-201ENST00000616510 88 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 RMST_7.1-201ENST00000621935 268 ntBASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV27A0A087WT01 AC023934.1-201ENST00000574529 2389 ntBASIC0.41□□□□□ -2.34
TRAV27A0A087WT01 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
TRAV27A0A087WT01 RNA5SP361-201ENST00000362686 118 ntBASIC0.41□□□□□ -2.34
TRAV27A0A087WT01 RNU4-79P-201ENST00000362764 141 ntBASIC0.41□□□□□ -2.34
TRAV27A0A087WT01 RNU6-1285P-201ENST00000363480 105 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms