Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SNORA3.4-201ENST00000515969 96 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC092325.1-201ENST00000566449 554 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC002400.1-201ENST00000569310 726 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC112220.2-201ENST00000605513 533 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC007742.2-201ENST00000618226 398 ntBASIC0.76□□□□□ -2.29
SCN10AQ9Y5Y9 AC008163.1-202ENST00000636004 2889 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 RN7SKP61-201ENST00000410642 295 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 Y_RNA.689-201ENST00000516589 107 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 AC099785.1-201ENST00000605697 437 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 AC091948.2-201ENST00000636510 279 ntBASIC0.75□□□□□ -2.29
SCN10AQ9Y5Y9 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 Y_RNA.294-201ENST00000364916 102 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 SNORA75B-201ENST00000384053 137 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 RNA5SP193-201ENST00000410353 107 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL590556.1-201ENST00000423231 483 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 MTND4P20-201ENST00000424125 869 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 PGBD4P5-201ENST00000445958 426 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AP000542.1-201ENST00000448473 371 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL512310.8-201ENST00000550183 120 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL136363.2-201ENST00000604173 851 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC009229.3-201ENST00000608056 282 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL355816.2-201ENST00000610049 647 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC084824.5-201ENST00000612009 413 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC130324.3-201ENST00000614165 542 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC018926.1-201ENST00000616335 435 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL158163.2-201ENST00000619110 700 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 FRG1KP-201ENST00000623592 341 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL161935.2-201ENST00000414627 60 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL163195.1-201ENST00000496941 348 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 MIR4711-201ENST00000578274 70 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL031775.1-201ENST00000607014 887 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL359547.2-201ENST00000615810 418 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 AL590240.4-201ENST00000616908 390 ntBASIC0.74□□□□□ -2.29
SCN10AQ9Y5Y9 MIR520A-201ENST00000384862 85 ntBASIC0.73□□□□□ -2.29
SCN10AQ9Y5Y9 MTND1P30-201ENST00000441241 901 ntBASIC0.73□□□□□ -2.29
SCN10AQ9Y5Y9 AC068587.4-201ENST00000533893 186 ntBASIC0.73□□□□□ -2.29
SCN10AQ9Y5Y9 U6.42-201ENST00000618440 107 ntBASIC0.73□□□□□ -2.29
SCN10AQ9Y5Y9 AL589743.1-201ENST00000551932 2712 ntBASIC0.73□□□□□ -2.29
SCN10AQ9Y5Y9 Y_RNA.33-201ENST00000362591 102 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 MTCO1P21-201ENST00000416634 589 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 DYNLT3P2-201ENST00000442517 295 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 MTCO3P9-201ENST00000506989 781 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 CYP3A52P-201ENST00000563326 91 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 VN1R82P-201ENST00000601481 356 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC069114.2-201ENST00000604699 304 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 MIR8087-201ENST00000612745 78 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-862P-201ENST00000362804 105 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 SNORD3E-201ENST00000362899 217 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 RNU6-946P-201ENST00000383878 107 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 SNORD116-12-201ENST00000384468 92 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 RN7SKP200-201ENST00000410564 320 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 MTCO2P1-201ENST00000424648 477 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC092628.1-201ENST00000436250 252 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 snoU13.27-201ENST00000459278 104 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC113347.3-201ENST00000509113 148 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 RNU5A-4P-201ENST00000516588 111 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC091163.3-201ENST00000518269 1144 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 AC068620.3-201ENST00000602749 560 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.72□□□□□ -2.29
SCN10AQ9Y5Y9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 RNY3P13-201ENST00000365542 102 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-1235P-201ENST00000384559 107 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 MIR608-201ENST00000384820 100 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AL589872.1-201ENST00000426602 288 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 RNU6-498P-201ENST00000459468 107 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AL356057.1-201ENST00000533798 831 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 HMGB1P33-201ENST00000563485 527 ntBASIC0.71□□□□□ -2.3
SCN10AQ9Y5Y9 AC018889.1-201ENST00000605372 397 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms