Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC069113.1-201ENST00000517763 267 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 COPS8P3-201ENST00000526024 482 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 CENPUP1-201ENST00000526649 1202 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 AK6P1-201ENST00000540219 478 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR4529-201ENST00000578110 78 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 AC068137.4-201ENST00000638485 296 ntBASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PCDHGA1Q9Y5H4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 Y_RNA.3-201ENST00000362331 103 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-105P-201ENST00000363909 104 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU4-66P-201ENST00000365199 138 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 SNORA25B-201ENST00000365507 128 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR181A1-201ENST00000385026 110 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 RNA5SP219-201ENST00000390940 113 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 GPM6BP3-201ENST00000442797 145 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 MTND3P16-201ENST00000452205 344 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AC087884.1-201ENST00000469738 328 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-1281P-201ENST00000516223 105 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AL118558.2-201ENST00000556294 238 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 VN1R80P-201ENST00000597126 338 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AL162413.1-201ENST00000603198 110 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 AC103705.1-201ENST00000619013 241 ntBASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PCDHGA1Q9Y5H4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU4-20P-201ENST00000365601 151 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR29B2-201ENST00000385055 81 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL590002.1-201ENST00000406554 418 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-908P-201ENST00000410160 94 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 POLHP1-201ENST00000411806 470 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SEPT14P3-201ENST00000439401 183 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL732372.2-207ENST00000445840 183 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SEPT14P2-201ENST00000453405 183 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SEPT14P4-201ENST00000513445 186 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SNORA14.1-201ENST00000516113 141 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-189P-201ENST00000516120 101 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-1038P-201ENST00000516516 104 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 Y_RNA.704-201ENST00000516851 102 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SNORD60.2-201ENST00000516883 86 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RN7SKP256-201ENST00000517201 314 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 FO082796.1-201ENST00000523795 183 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AC016957.1-201ENST00000534895 309 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL157687.1-201ENST00000554853 619 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 SNRPGP17-201ENST00000603780 214 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AL159153.1-201ENST00000619688 317 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 YWHAEP7-203ENST00000622054 312 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 AC139792.2-201ENST00000624218 587 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR1321-201ENST00000637766 79 ntBASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PCDHGA1Q9Y5H4 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 SNORA80E-201ENST00000384744 137 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR514A2-201ENST00000385131 88 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR514A3-201ENST00000385132 88 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AL162578.1-201ENST00000406202 378 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-1068P-201ENST00000410958 103 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AL117339.3-201ENST00000418733 162 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 USP9YP18-201ENST00000425912 695 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AL121594.1-201ENST00000475906 575 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 RNA5SP458-201ENST00000516188 119 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC115990.1-201ENST00000526957 301 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 TPRKBP2-201ENST00000565969 475 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 VN1R107P-201ENST00000601784 209 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC068137.3-201ENST00000639191 341 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 AC008555.8-201ENST00000623602 2168 ntBASIC2.23□□□□□ -2.05
PCDHGA1Q9Y5H4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
PCDHGA1Q9Y5H4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.22□□□□□ -2.05
PCDHGA1Q9Y5H4 AC069528.2-201ENST00000624849 1991 ntBASIC2.22□□□□□ -2.05
PCDHGA1Q9Y5H4 Y_RNA.40-201ENST00000362645 93 ntBASIC2.22□□□□□ -2.05
PCDHGA1Q9Y5H4 RNU6-428P-201ENST00000362942 107 ntBASIC2.22□□□□□ -2.05
PCDHGA1Q9Y5H4 Y_RNA.378-201ENST00000365652 113 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms