Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
PCDHGA3Q9Y5H0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
PCDHGA3Q9Y5H0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORD115-32-201ENST00000364079 82 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MICF-203ENST00000432679 129 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AL353997.1-201ENST00000432936 108 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC006028.1-201ENST00000438379 402 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 snoU13.30-201ENST00000458951 104 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC021205.2-201ENST00000480069 347 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AL163540.1-201ENST00000485382 386 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.661-201ENST00000516003 99 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR2276-201ENST00000516886 89 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC027176.1-201ENST00000560204 514 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC004584.2-201ENST00000570407 410 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR5680-201ENST00000577577 84 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 RMST_6.1-201ENST00000611980 203 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR7157-201ENST00000635801 60 ntBASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA3Q9Y5H0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 Z75746.1-201ENST00000440243 2080 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-655P-201ENST00000362858 107 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA29-201ENST00000384183 140 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR128-1-201ENST00000384921 82 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA48.5-201ENST00000391143 135 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 Z98742.2-201ENST00000431564 187 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA59A-201ENST00000459326 152 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RPL23AP75-201ENST00000491601 451 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA25.10-201ENST00000515926 124 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.711-201ENST00000516993 102 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 RPL23AP88-201ENST00000605759 454 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AC083806.3-201ENST00000614016 455 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PCDHGA3Q9Y5H0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-99P-201ENST00000364721 107 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 Y_RNA.326-201ENST00000365176 113 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 RNA5SP494-201ENST00000410653 129 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC126124.2-201ENST00000413542 321 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AL590135.1-201ENST00000422215 156 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC019205.3-201ENST00000424573 156 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC008267.5-201ENST00000424928 265 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC016700.2-201ENST00000446011 156 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC015911.1-201ENST00000495111 156 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 ELOCP31-201ENST00000540463 467 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 AC103810.1-201ENST00000579873 453 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR4276-201ENST00000584832 70 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA43.4-201ENST00000629559 138 ntBASIC3.25□□□□□ -1.89
PCDHGA3Q9Y5H0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU5B-2P-201ENST00000363036 113 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 RNU6-137P-201ENST00000363680 108 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA12.2-201ENST00000391040 156 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 SNORA11.2-201ENST00000408318 127 ntBASIC3.24□□□□□ -1.89
PCDHGA3Q9Y5H0 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms