Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 SNORD1A-201ENST00000364968 72 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-45P-201ENST00000384471 107 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 MIR513B-201ENST00000385136 84 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA11.2-201ENST00000408318 127 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 OR6C66P-201ENST00000414917 930 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC007098.1-201ENST00000420122 367 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 VN1R108P-201ENST00000431580 830 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AL591806.2-201ENST00000433122 173 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC244670.1-201ENST00000436879 112 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC243964.1-201ENST00000441814 261 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 RPL30P7-201ENST00000479312 323 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC079140.5-201ENST00000507882 310 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC079140.3-201ENST00000511111 550 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 MIR449C-201ENST00000516047 92 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC022616.3-201ENST00000523940 148 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 HMGB1P33-201ENST00000563485 527 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AL391834.2-201ENST00000609982 546 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AL078595.3-201ENST00000623815 1166 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 AC068205.3-201ENST00000636385 468 ntBASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
RHBDD3Q9Y3P4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 RNU1-17P-201ENST00000363022 152 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA12-201ENST00000391162 147 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 RN7SKP61-201ENST00000410642 295 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 MTCO1P21-201ENST00000416634 589 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 SNRPGP13-201ENST00000442212 177 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC079140.2-201ENST00000506193 142 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC112191.3-201ENST00000604371 277 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 MIR7844-201ENST00000616161 122 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC022306.3-201ENST00000619930 550 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC097372.5-201ENST00000623665 376 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 AC106754.1-201ENST00000562632 1513 ntBASIC1.23□□□□□ -2.21
RHBDD3Q9Y3P4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AC092268.1-201ENST00000342691 405 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 U3.4-201ENST00000363352 213 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 SNORA20.2-201ENST00000383922 131 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-43P-201ENST00000384302 107 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 Y_RNA.576-201ENST00000384781 102 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 MIR764-201ENST00000390811 85 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 RNU6-174P-201ENST00000410406 106 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 SSR1P2-201ENST00000415208 787 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AL354692.1-201ENST00000423044 315 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AC000111.3-201ENST00000433478 193 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AC069257.2-201ENST00000441819 155 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 USP9YP12-201ENST00000450481 570 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 RNA5SP269-201ENST00000459032 137 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AC012414.6-201ENST00000568241 401 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 MIR3923-201ENST00000579521 83 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 MIR8063-201ENST00000621930 81 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 AC005858.4-201ENST00000623191 700 ntBASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.22□□□□□ -2.21
RHBDD3Q9Y3P4 MTND4P14-201ENST00000435799 1354 ntBASIC1.21□□□□□ -2.21
RHBDD3Q9Y3P4 RNU5E-5P-201ENST00000365379 116 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 SNORA32.2-201ENST00000384049 122 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 RNA5SP213-201ENST00000391031 106 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 RNU6-293P-201ENST00000411259 106 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AL590135.1-201ENST00000422215 156 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC019205.3-201ENST00000424573 156 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC016700.2-201ENST00000446011 156 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 MTND2P14-201ENST00000482139 351 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC015911.1-201ENST00000495111 156 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC023050.3-201ENST00000541142 333 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 MIR4303-201ENST00000581299 66 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 HMGN1P30-201ENST00000589286 268 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC110760.3-201ENST00000598794 467 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 Z99289.3-201ENST00000605586 594 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC008945.2-201ENST00000606056 604 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
RHBDD3Q9Y3P4 AC104073.3-201ENST00000610942 955 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms