Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SF3B6Q9Y3B4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AL109809.4-201ENST00000603520 2185 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 MAPK10-372ENST00000641954 3413 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 RNA5SP197-201ENST00000363357 119 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 SNORD35B-201ENST00000363660 87 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 PCNPP3-201ENST00000393579 471 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 RNU2-61P-201ENST00000411069 191 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC096649.2-201ENST00000416186 393 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC083863.1-201ENST00000438811 231 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC005042.3-201ENST00000453230 174 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC010618.1-201ENST00000469924 477 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC091167.1-201ENST00000492017 396 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 RPL29P14-201ENST00000495837 428 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 SNORA27.4-201ENST00000516650 95 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 CYCSP23-201ENST00000519781 313 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AP002392.1-201ENST00000537692 208 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AL137100.2-201ENST00000555786 315 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC026470.2-201ENST00000561492 181 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 MIR3939-201ENST00000582614 106 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 MIR5684-201ENST00000585074 65 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AL356575.1-201ENST00000603008 283 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC004467.1-201ENST00000615678 330 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AL591424.2-201ENST00000617023 128 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 MIR7151-201ENST00000617477 60 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 AC091932.3-201ENST00000624223 323 ntBASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
SF3B6Q9Y3B4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 RNU1-132P-201ENST00000364300 164 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 SNORA70.2-201ENST00000364506 135 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 SNORA18.3-201ENST00000384122 132 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 RNU6-662P-201ENST00000384253 104 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 RNU6-1289P-201ENST00000384431 106 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 RNA5SP201-201ENST00000410316 124 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC104332.1-201ENST00000440471 797 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 snoU13.14-201ENST00000459372 104 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC112771.1-201ENST00000463581 102 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 RPL23AP70-201ENST00000483361 460 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC105137.1-201ENST00000484355 562 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 SNORA31.21-201ENST00000517180 77 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC090877.1-201ENST00000561418 344 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC025281.1-201ENST00000567026 265 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MIR3145-201ENST00000580727 82 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MIR4697-201ENST00000582977 78 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MIR3138-201ENST00000585238 82 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 ARF4P1-201ENST00000605447 541 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MIR6798-201ENST00000612887 67 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 AC018692.3-201ENST00000623929 123 ntBASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SF3B6Q9Y3B4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 MIR383-201ENST00000362257 73 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 RNU4-15P-201ENST00000362613 141 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 SNORA46.1-201ENST00000391069 153 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 COX6CP10-201ENST00000416832 224 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC002075.2-201ENST00000425207 252 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 RNU7-120P-201ENST00000459334 63 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 RPL7P49-201ENST00000471402 708 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 SNORA31.9-201ENST00000516429 84 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AP002001.1-203ENST00000534002 267 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC025627.2-201ENST00000576220 160 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 SNRPGP20-201ENST00000604477 205 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC011921.3-201ENST00000605540 361 ntBASIC3.5□□□□□ -1.85
SF3B6Q9Y3B4 AC083809.1-201ENST00000615051 472 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms