Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AC144521.1-201ENST00000607148 956 ntBASIC0.7□□□□□ -2.3
ERGIC3Q9Y282 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.7□□□□□ -2.3
ERGIC3Q9Y282 AL359547.2-201ENST00000615810 418 ntBASIC0.7□□□□□ -2.3
ERGIC3Q9Y282 OR4G3P-201ENST00000633500 913 ntBASIC0.7□□□□□ -2.3
ERGIC3Q9Y282 Y_RNA.46-201ENST00000362695 102 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 SNORA63D-201ENST00000364359 132 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 RAP1BP3-201ENST00000407180 549 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 RNU4-22P-201ENST00000411058 166 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AL031779.1-201ENST00000415663 330 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 SNRPEP8-201ENST00000442866 260 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC132479.1-201ENST00000449160 144 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 ART2BP-201ENST00000453501 499 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 snoU13.30-201ENST00000458951 104 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC010587.2-201ENST00000511727 448 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 RNA5SP481-201ENST00000516814 122 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 MIR548AC-201ENST00000585049 88 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AL606834.3-201ENST00000602615 496 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AL590229.1-201ENST00000603497 542 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC069114.2-201ENST00000604699 304 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 BX284668.6-201ENST00000606899 438 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AL021368.1-201ENST00000607490 540 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AL365434.2-201ENST00000607979 234 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 AC131159.1-201ENST00000621854 213 ntBASIC0.69□□□□□ -2.3
ERGIC3Q9Y282 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 RNU6-1285P-201ENST00000363480 105 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 SNORD116.1-201ENST00000365628 92 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 Y_RNA.465-201ENST00000384293 102 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 RNU6-1179P-201ENST00000384667 107 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 MIR578-201ENST00000384828 96 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 SNX2P2-201ENST00000424553 323 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AL163195.1-201ENST00000496941 348 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 ATP5EP1-201ENST00000510257 156 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AC079140.3-201ENST00000511111 550 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 SNORD60.2-201ENST00000516883 86 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AC123904.2-201ENST00000548059 300 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 VN1R107P-201ENST00000601784 209 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 AP002782.1-201ENST00000623107 614 ntBASIC0.68□□□□□ -2.3
ERGIC3Q9Y282 RNU6-78P-201ENST00000362897 107 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 Y_RNA.164-201ENST00000363709 102 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 RNU6-1019P-201ENST00000364424 107 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 SNORA25.9-201ENST00000365087 128 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 MIR544A-201ENST00000384855 91 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 RNU6-1176P-201ENST00000390955 107 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 MTCO3P41-201ENST00000414801 328 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC145146.1-201ENST00000496370 254 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 MTCO3P28-201ENST00000513351 515 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 RN7SKP88-201ENST00000516847 250 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 CYCSP23-201ENST00000519781 313 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC109446.2-201ENST00000567872 497 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 AC092106.3-201ENST00000611308 722 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 7SK.8-201ENST00000612110 250 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 MIR6504-201ENST00000613520 61 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 7SK.11-201ENST00000615477 250 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 7SK.13-201ENST00000622040 250 ntBASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ERGIC3Q9Y282 Y_RNA.4-201ENST00000362333 112 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 RNU6-862P-201ENST00000362804 105 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 SNORD114-27-201ENST00000363766 70 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 SNORA12.2-201ENST00000391040 156 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC019070.1-201ENST00000415008 1024 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 RNU1-86P-201ENST00000516108 154 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 SNORA19.3-201ENST00000516165 130 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 RNU1-107P-201ENST00000516617 154 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC107934.1-201ENST00000522215 217 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC115990.1-201ENST00000526957 301 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 MIR3664-201ENST00000579074 99 ntBASIC0.66□□□□□ -2.3
ERGIC3Q9Y282 AC136443.5-201ENST00000603741 370 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms