Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.15□□□□□ -1.58
HPS5Q9UPZ3 MIR3065-201ENST00000390137 79 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 AL603914.1-201ENST00000401964 204 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 SNORA79-201ENST00000408376 140 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 AC079587.1-201ENST00000603846 277 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 NEAT1-202ENST00000501122 22743 ntBASIC5.15□□□□□ -1.59
HPS5Q9UPZ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 MTND5P18-201ENST00000445624 1801 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 Y_RNA.243-201ENST00000364481 109 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 RNA5SP22-201ENST00000365393 109 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 Y_RNA.415-201ENST00000384012 112 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AC109327.2-201ENST00000448339 378 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AC006517.1-201ENST00000480485 328 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 RNU5F-2P-201ENST00000516066 82 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 RNA5SP497-201ENST00000516081 97 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 RN7SKP12-201ENST00000516275 143 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 RNU6-107P-201ENST00000516643 102 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AC025946.2-201ENST00000603398 234 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AC113403.1-201ENST00000604910 193 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 AL138721.1-201ENST00000616756 179 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 MAPK10-303ENST00000641324 3959 ntBASIC5.14□□□□□ -1.59
HPS5Q9UPZ3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 RNU6-136P-201ENST00000384663 107 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 RPS3AP1-201ENST00000413190 320 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 SNRPGP8-201ENST00000454064 226 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 RPL31P41-201ENST00000477967 372 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 RNU6-65P-201ENST00000516332 98 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 SNORA40.13-201ENST00000516379 120 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 Y_RNA.690-201ENST00000516603 95 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 IGLV3-26-201ENST00000520756 302 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 CR383656.8-201ENST00000549046 145 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AC136601.2-201ENST00000604356 474 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 AL161912.2-201ENST00000565707 3007 ntBASIC5.13□□□□□ -1.59
HPS5Q9UPZ3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 MFSD8-242ENST00000641690 4199 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 RNU6-978P-201ENST00000364371 103 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 RNA5SP130-201ENST00000364431 114 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 SNORA73.2-201ENST00000364946 201 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 SNORA51.10-201ENST00000384418 136 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 SNORA48.5-201ENST00000391143 135 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 RPL21P65-201ENST00000406094 466 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 RNU6-592P-201ENST00000411333 103 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 RPL27AP8-201ENST00000424277 446 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AC006445.2-201ENST00000510061 472 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AC100770.1-201ENST00000532310 322 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AC131055.1-201ENST00000584626 316 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 AC019176.2-201ENST00000611579 315 ntBASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HPS5Q9UPZ3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms