Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU4-17P-201ENST00000365598 141 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.412-201ENST00000384001 104 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-217P-201ENST00000384164 104 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AL512633.1-201ENST00000399931 655 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 SNORA3.3-201ENST00000408712 125 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 RN7SKP61-201ENST00000410642 295 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 RN7SKP53-201ENST00000411337 315 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 TBCAP1-201ENST00000436520 327 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AL356535.1-201ENST00000440335 398 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 HMGB3P8-201ENST00000449709 577 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 SNORD116-25-201ENST00000516517 92 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 CR383656.8-201ENST00000549046 145 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 MIR6134-201ENST00000617606 109 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-151P-201ENST00000364158 107 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AP000705.1-201ENST00000454567 350 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AL133162.1-201ENST00000463228 453 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 SNRPGP3-201ENST00000469405 227 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 RPS27AP9-201ENST00000477681 438 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 RPL32P34-201ENST00000486380 400 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 RPL30P5-201ENST00000494923 336 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 RNA5SP272-201ENST00000516095 111 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AC100821.1-201ENST00000523153 2479 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 MIR3124-201ENST00000582636 67 ntBASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.91□□□□□ -1.62
ZC3H4Q9UPT8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
ZC3H4Q9UPT8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.9□□□□□ -1.62
ZC3H4Q9UPT8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.9□□□□□ -1.62
ZC3H4Q9UPT8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZC3H4Q9UPT8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
ZC3H4Q9UPT8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 RNA5SP267-201ENST00000364893 126 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 MIR93-201ENST00000385024 80 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-1168P-201ENST00000390831 104 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 AL357075.1-201ENST00000404107 726 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 NDUFB4P6-201ENST00000436819 366 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 RN7SL601P-201ENST00000471221 293 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 RPL30P12-201ENST00000474666 353 ntBASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
ZC3H4Q9UPT8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-727P-201ENST00000363592 107 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-312P-201ENST00000364629 107 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 AC012306.1-201ENST00000423267 114 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 RPL29P14-201ENST00000495837 428 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-581P-201ENST00000516214 105 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 SNORA31.23-201ENST00000517219 133 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 YPEL5P3-201ENST00000547227 352 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ZC3H4Q9UPT8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 CUL1P1-201ENST00000509510 2425 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 AC007256.1-201ENST00000392253 2765 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RNA5SP97-201ENST00000365006 84 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RNU6-793P-201ENST00000384233 104 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 Y_RNA.586-201ENST00000391146 98 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RNA5SP39-201ENST00000411245 120 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 AL591419.1-201ENST00000427423 339 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 AC078809.1-201ENST00000427601 140 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RPL39P29-201ENST00000447779 157 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RPS20P10-201ENST00000451209 253 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 RN7SKP18-201ENST00000516005 275 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 CYCSP23-201ENST00000519781 313 ntBASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.88□□□□□ -1.63
ZC3H4Q9UPT8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms