Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CYCSP39-201ENST00000565821 309 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 OR1M4P-201ENST00000589199 287 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 AL031601.2-202ENST00000622650 282 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 DDX10P1-201ENST00000448545 1933 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 BX322639.1-202ENST00000423987 2213 ntBASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NOTCH3Q9UM47 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 UBE2L2-201ENST00000254302 429 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-153P-201ENST00000364422 104 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 BMS1P22-201ENST00000414726 313 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RPS12P5-201ENST00000423449 371 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RAB28P5-201ENST00000427490 651 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC234775.1-201ENST00000454247 670 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 U8.21-201ENST00000459536 136 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1037P-201ENST00000459571 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AP001324.2-201ENST00000461163 319 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC037487.3-201ENST00000606668 112 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 uc_338.25-201ENST00000613756 156 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AL110115.1-201ENST00000614396 364 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC243829.7-201ENST00000633081 225 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC007785.2-201ENST00000598627 1916 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1020P-201ENST00000363684 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-595P-201ENST00000363944 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-923P-201ENST00000364753 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU6-700P-201ENST00000391043 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 LAP3P1-201ENST00000403648 294 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.590-201ENST00000410140 107 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNA5SP494-201ENST00000410653 129 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RPL26P6-201ENST00000440913 438 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RPL30P10-201ENST00000488148 337 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RNU2-31P-201ENST00000516954 155 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 MIR5692A1-201ENST00000580523 69 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC008962.1-201ENST00000605729 304 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 MIR15A-201ENST00000607334 83 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AL589994.2-201ENST00000621124 579 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AP001148.1-201ENST00000624124 2359 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 AC008725.1-201ENST00000605123 2263 ntBASIC2.31□□□□□ -2.04
NOTCH3Q9UM47 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 MTND5P9-201ENST00000503854 1755 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU6-1035P-201ENST00000384477 107 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNA5SP296-201ENST00000410523 111 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU2-22P-201ENST00000411266 212 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 snoU13.23-201ENST00000458863 104 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AL158032.1-201ENST00000605401 106 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC108706.1-201ENST00000611053 297 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU5B-2P-201ENST00000363036 113 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU6-804P-201ENST00000384286 107 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 Y_RNA.497-201ENST00000384447 98 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU6-918P-201ENST00000391219 106 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RNU6-394P-201ENST00000410735 107 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RPL31P2-201ENST00000413849 377 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RN7SL442P-201ENST00000473804 320 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 ERHP1-201ENST00000523006 310 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC233702.2-202ENST00000562547 291 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 MIR4504-201ENST00000577413 92 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AL359881.1-201ENST00000602916 267 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 RPL23AP88-201ENST00000605759 454 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AL590808.1-201ENST00000618696 141 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AC241377.1-201ENST00000619797 406 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 AL365265.1-201ENST00000621045 234 ntBASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NOTCH3Q9UM47 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NOTCH3Q9UM47 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms