Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PAXBP1P1-201ENST00000449315 447 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC006026.2-201ENST00000457376 180 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 RPL39P38-201ENST00000467018 153 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC087897.1-201ENST00000550134 156 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL442163.3-201ENST00000554110 156 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 BNIP3P8-201ENST00000597863 560 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AL138889.2-201ENST00000603883 242 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC105148.1-201ENST00000604961 409 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
COMMD3Q9UBI1 RNA5SP347-201ENST00000362445 119 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RNU6-777P-201ENST00000364265 104 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RNU6-609P-201ENST00000365459 107 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RNU6-910P-201ENST00000390844 107 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 ARL5AP1-201ENST00000418991 388 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RPS26P45-201ENST00000471748 340 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 FABP5P5-201ENST00000515537 406 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 SNORA31.2-201ENST00000516019 134 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RNU6-677P-201ENST00000516914 101 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 MIR3146-201ENST00000580367 79 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 MIR4714-201ENST00000580728 77 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 MTATP6P3-201ENST00000581686 676 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 AP001596.2-201ENST00000608410 312 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 AC106858.1-201ENST00000637497 429 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 AC099654.8-201ENST00000637757 681 ntBASIC0.32□□□□□ -2.36
COMMD3Q9UBI1 RNU6-862P-201ENST00000362804 105 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 MTCO1P17-201ENST00000411522 491 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 MTND2P3-201ENST00000452458 470 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 RPS29P1-201ENST00000465274 159 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 SUMO2P5-201ENST00000506790 245 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 ATP5EP1-201ENST00000510257 156 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 MIR449C-201ENST00000516047 92 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 RNA5SP255-201ENST00000516370 107 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 SNORA43.2-201ENST00000516652 128 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 DEFB130C-202ENST00000530001 230 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 AL136520.1-202ENST00000555494 763 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 AL512347.1-201ENST00000566420 503 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 AC174048.1-201ENST00000603389 144 ntBASIC0.31□□□□□ -2.36
COMMD3Q9UBI1 SNORD114-22-201ENST00000365423 72 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 RNA5SP259-201ENST00000365541 109 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 SMIM11P1-201ENST00000369586 178 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 MIR1305-201ENST00000408300 86 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 MIR1276-201ENST00000408707 83 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 MTCO3P41-201ENST00000414801 328 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 ELOCP9-201ENST00000418624 239 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 snoU109.2-201ENST00000459316 135 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 RNU5F-2P-201ENST00000516066 82 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 SNORD79.1-201ENST00000516069 84 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC092451.2-201ENST00000538746 658 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC018659.1-201ENST00000551083 169 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC091489.2-201ENST00000566263 604 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC068790.6-201ENST00000602558 258 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AL353765.1-201ENST00000605514 183 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC078880.5-201ENST00000617845 421 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 AL138955.1-201ENST00000622881 1040 ntBASIC0.3□□□□□ -2.36
COMMD3Q9UBI1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 Y_RNA.191-201ENST00000363972 113 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 RNU1-96P-201ENST00000364163 162 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 RNU6-534P-201ENST00000364877 106 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 SNORA32.2-201ENST00000384049 122 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 RNU6-278P-201ENST00000390945 109 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 RN7SKP266-201ENST00000410232 287 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 COX6CP10-201ENST00000416832 224 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 USP9YP14-201ENST00000430663 563 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC092628.1-201ENST00000436250 252 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC007969.2-201ENST00000441891 191 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 SNRPEP8-201ENST00000442866 260 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL353718.1-201ENST00000451028 517 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 TPRKBP1-201ENST00000456243 481 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AL139824.2-201ENST00000458731 1095 ntBASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.29□□□□□ -2.36
COMMD3Q9UBI1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms