Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 RNA5SP125-201ENST00000364843 120 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 RNU6-301P-201ENST00000384277 107 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 Y_RNA.500-201ENST00000384466 111 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HACD3Q9P035 RNU4-53P-201ENST00000410828 140 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 CYCSP48-201ENST00000417124 323 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 BX276092.3-201ENST00000424182 230 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AL513185.2-201ENST00000425543 193 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AL591043.1-201ENST00000432461 424 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 NDUFA5P4-201ENST00000436704 385 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HACD3Q9P035 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.26□□□□□ -2.05
HACD3Q9P035 EEF1B2P7-201ENST00000451177 676 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 UBE2DNL-203ENST00000474922 222 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 SMURF2P1-201ENST00000514992 481 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 RNA5SP112-201ENST00000515937 99 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AP000763.2-201ENST00000540641 163 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 SNRPGP18-201ENST00000553000 214 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 AC096772.1-201ENST00000609146 564 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
HACD3Q9P035 AC009831.4-201ENST00000620744 325 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AC006504.8-201ENST00000621046 635 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 AC100810.6-201ENST00000638068 285 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.26□□□□□ -2.05
HACD3Q9P035 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HACD3Q9P035 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HACD3Q9P035 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.25□□□□□ -2.05
HACD3Q9P035 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HACD3Q9P035 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.25□□□□□ -2.05
HACD3Q9P035 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 RNU1-72P-201ENST00000362976 153 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 Y_RNA.157-201ENST00000363638 102 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HACD3Q9P035 Y_RNA.530-201ENST00000384587 101 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 SNORA48.3-201ENST00000391081 134 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 MIR450B-201ENST00000401182 78 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 RPS29P13-201ENST00000402041 169 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 RNA5SP390-201ENST00000410191 113 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 RPL30P16-201ENST00000419341 429 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AL139415.2-201ENST00000431968 163 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC243964.1-201ENST00000441814 261 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC007547.1-201ENST00000462177 490 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC090515.1-201ENST00000465295 476 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 RPL22P13-201ENST00000493291 347 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
HACD3Q9P035 RNA5SP200-201ENST00000516360 103 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.25□□□□□ -2.05
HACD3Q9P035 PSMA3P-201ENST00000555485 635 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC064836.2-201ENST00000609491 462 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.25□□□□□ -2.05
HACD3Q9P035 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HACD3Q9P035 MTND4P1-201ENST00000457501 1466 ntBASIC2.25□□□□□ -2.05
HACD3Q9P035 MIR449A-201ENST00000362113 91 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-1252P-201ENST00000363054 104 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 SNORD114-19-201ENST00000363072 75 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 Y_RNA.100-201ENST00000363141 102 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-529P-201ENST00000363383 104 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 SNORD113-7-201ENST00000363762 77 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-1329P-201ENST00000365664 107 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 U6atac.2-201ENST00000408644 118 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-293P-201ENST00000411259 106 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.24□□□□□ -2.05
HACD3Q9P035 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 EIF4EP4-201ENST00000424916 578 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 MTND1P2-201ENST00000430604 821 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.24□□□□□ -2.05
HACD3Q9P035 AL359672.1-201ENST00000442302 409 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 MTCO2P3-201ENST00000442543 421 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-358P-201ENST00000516564 75 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 RNU6-1314P-201ENST00000517139 104 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 AF235103.2-201ENST00000525753 346 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.24□□□□□ -2.05
HACD3Q9P035 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.24□□□□□ -2.05
HACD3Q9P035 BNIP3P16-201ENST00000589779 534 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 VN1R107P-201ENST00000601784 209 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 ELOCP5-201ENST00000604924 333 ntBASIC2.24□□□□□ -2.05
HACD3Q9P035 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.24□□□□□ -2.05
HACD3Q9P035 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.24□□□□□ -2.05
HACD3Q9P035 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.23□□□□□ -2.05
HACD3Q9P035 Y_RNA.40-201ENST00000362645 93 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 VN1R36P-201ENST00000414936 291 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 AC138623.1-201ENST00000418060 216 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 AL356320.1-201ENST00000429616 163 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.23□□□□□ -2.05
HACD3Q9P035 AC008628.2-201ENST00000502605 298 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.23□□□□□ -2.05
HACD3Q9P035 AK3P2-201ENST00000507976 429 ntBASIC2.23□□□□□ -2.05
HACD3Q9P035 AC092436.3-201ENST00000511788 257 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms