Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AL031659.1-201ENST00000447075 539 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 MTCO3P8-201ENST00000453691 755 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC006026.2-201ENST00000457376 180 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC009812.2-201ENST00000517657 457 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.09□□□□□ -1.91
EHD3Q9NZN3 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
EHD3Q9NZN3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
EHD3Q9NZN3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
EHD3Q9NZN3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
EHD3Q9NZN3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
EHD3Q9NZN3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 CD24P4-201ENST00000382840 243 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 Y_RNA.401-201ENST00000383965 117 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 SNORA51.11-201ENST00000384442 131 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 HMGN2P10-201ENST00000448085 265 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC021739.1-201ENST00000559631 174 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 MIR7975-201ENST00000619350 68 ntBASIC3.08□□□□□ -1.92
EHD3Q9NZN3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EHD3Q9NZN3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 ADAM3A-203ENST00000461344 2157 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 SNORA63.1-201ENST00000362493 131 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 RNU6-702P-201ENST00000364982 107 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 SNORA1.3-201ENST00000384676 136 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC074117.2-201ENST00000417130 397 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AL590664.1-201ENST00000448065 339 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC115115.1-201ENST00000449927 248 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AL513124.1-201ENST00000450410 614 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 RN7SKP210-201ENST00000459176 261 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 RPL30P14-201ENST00000482744 348 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC093852.1-201ENST00000503587 266 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 CR383656.8-201ENST00000549046 145 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 NACAP3-201ENST00000552100 481 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AC110588.1-201ENST00000559699 137 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.07□□□□□ -1.92
EHD3Q9NZN3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
EHD3Q9NZN3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 Y_RNA.152-201ENST00000363578 100 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 MIR628-201ENST00000385229 95 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RPL21P1-201ENST00000399532 476 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 MIR190B-201ENST00000401119 79 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC007969.2-201ENST00000441891 191 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RNU7-87P-201ENST00000459343 62 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 TOMM22P6-201ENST00000465035 409 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC074250.1-201ENST00000511117 192 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RNA5SP217-201ENST00000515959 91 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RNU6-397P-201ENST00000516226 104 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC110491.1-201ENST00000562191 2010 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC104581.2-201ENST00000572227 430 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC010928.2-201ENST00000588017 287 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 RAC1P9-201ENST00000604990 392 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 MIR6076-201ENST00000617521 113 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AC024581.2-201ENST00000619986 252 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AP000560.1-201ENST00000624150 1937 ntBASIC3.06□□□□□ -1.92
EHD3Q9NZN3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.06□□□□□ -1.92
EHD3Q9NZN3 AP003122.5-201ENST00000527668 3766 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms