Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AC021739.1-201ENST00000559631 174 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 MIR3529-201ENST00000637713 78 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 AC135776.4-201ENST00000624300 1904 ntBASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TMEM39AQ9NV64 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC092268.1-201ENST00000342691 405 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.122-201ENST00000363331 96 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RNU1-33P-201ENST00000364249 162 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RNY4P28-201ENST00000365281 93 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RNU6-514P-201ENST00000384208 107 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RNU6-662P-201ENST00000384253 104 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.570-201ENST00000384750 101 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 COX6CP10-201ENST00000416832 224 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 BPY2DP-201ENST00000422208 265 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RPL39P29-201ENST00000447779 157 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC008155.2-201ENST00000464337 397 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RPL30P12-201ENST00000474666 353 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AP001025.1-201ENST00000486139 332 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 SNORD116-28-201ENST00000516123 91 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 RNU2-58P-201ENST00000516403 183 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC008749.1-201ENST00000597650 306 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 Z83818.1-201ENST00000603584 150 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 SNORA62.6-201ENST00000606322 83 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 IGHVIII-44-202ENST00000636235 289 ntBASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TMEM39AQ9NV64 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.230-201ENST00000364348 109 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RNU6-1175P-201ENST00000365200 107 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.590-201ENST00000410140 107 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RNU6-651P-201ENST00000411040 105 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 AC005326.1-201ENST00000429197 123 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 COX6CP14-201ENST00000469580 174 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RNU5F-8P-201ENST00000515941 111 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 Y_RNA.679-201ENST00000516416 91 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RNU6-255P-201ENST00000516957 105 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 MIR4513-201ENST00000581077 86 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 AC010620.2-201ENST00000600135 313 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TMEM39AQ9NV64 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 AC110491.1-201ENST00000562191 2010 ntBASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 AL672296.1-201ENST00000427780 2158 ntBASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.09□□□□□ -1.76
TMEM39AQ9NV64 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 Y_RNA.275-201ENST00000364726 110 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 SNORA19-201ENST00000384737 128 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 RNU2-61P-201ENST00000411069 191 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 SETP5-201ENST00000437270 562 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 AC010095.1-201ENST00000443543 144 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 AP000705.1-201ENST00000454567 350 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 RNA5SP310-201ENST00000459084 116 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 AC006445.2-201ENST00000510061 472 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 ACA59.2-201ENST00000517061 156 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 IGKV2-38-201ENST00000517443 247 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 AC006199.1-201ENST00000548728 219 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 MIR7851-201ENST00000610611 160 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 MIR8057-201ENST00000620957 69 ntBASIC4.08□□□□□ -1.76
TMEM39AQ9NV64 AC006001.4-201ENST00000622243 395 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms