Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC104237.2-201ENST00000612456 443 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 OR4G1P-203ENST00000641984 1631 ntBASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
BLOC1S4Q9NUP1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 RNU4-20P-201ENST00000365601 151 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-214P-201ENST00000384130 107 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 MIR29C-201ENST00000385231 88 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AL590002.1-201ENST00000406554 418 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 IPO7P1-201ENST00000442031 636 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 U8.21-201ENST00000459536 136 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 SNORA31.25-201ENST00000517242 134 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 TRAV32-201ENST00000553993 340 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 MIR1321-201ENST00000637766 79 ntBASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.51□□□□□ -2.01
BLOC1S4Q9NUP1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-944P-201ENST00000364023 107 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-483P-201ENST00000384088 108 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 SNORA26.3-201ENST00000391119 136 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 MIR1294-201ENST00000408503 142 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 SRIP3-201ENST00000413200 219 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AL359672.1-201ENST00000442302 409 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC107953.1-201ENST00000522216 297 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AL118558.2-201ENST00000556294 238 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC021231.3-201ENST00000558497 370 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 EIF1P4-201ENST00000572664 335 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 MIR3923-201ENST00000579521 83 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC007229.1-201ENST00000590455 412 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC092954.2-201ENST00000609103 430 ntBASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
BLOC1S4Q9NUP1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AL445529.1-201ENST00000398713 389 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 IFNA20P-201ENST00000436840 528 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AC016256.1-201ENST00000547971 354 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 MYL12BP1-201ENST00000569826 507 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 MIR5692C1-201ENST00000585309 91 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AP000654.2-201ENST00000605633 586 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AC012557.2-201ENST00000605919 418 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AL132822.1-201ENST00000617063 513 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AC009831.4-201ENST00000620744 325 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 AL136221.1-201ENST00000621449 509 ntBASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
BLOC1S4Q9NUP1 Y_RNA.318-201ENST00000365131 97 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU4-26P-201ENST00000410270 107 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU2-48P-201ENST00000410694 191 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU4-53P-201ENST00000410828 140 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RN7SKP284-201ENST00000411002 343 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 USP9YP27-201ENST00000418455 438 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC145146.1-201ENST00000496370 254 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU6-720P-201ENST00000516363 108 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 RNU2-19P-201ENST00000517288 84 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.48□□□□□ -2.01
BLOC1S4Q9NUP1 AC109635.3-201ENST00000529536 185 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms