Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 RNU2-69P-201ENST00000516061 100 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 SNORA31.16-201ENST00000516773 139 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AC109446.1-201ENST00000566172 220 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 MIR3169-201ENST00000578032 83 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 MIR4648-201ENST00000580107 72 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 RSL24D1P11-201ENST00000591045 491 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AC116312.1-201ENST00000606841 314 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AC009161.2-201ENST00000624626 138 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 AP000560.1-201ENST00000624150 1937 ntBASIC1.76□□□□□ -2.13
POLE3Q9NRF9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.75□□□□□ -2.13
POLE3Q9NRF9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RNU6-181P-201ENST00000363225 107 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 MIR30A-201ENST00000385092 71 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RNU2-9P-201ENST00000410194 145 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RNA5SP100-201ENST00000410903 110 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RNA5SP59-201ENST00000410922 110 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RPS20P15-201ENST00000412792 311 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 SCARNA18-201ENST00000459004 134 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RPL38P4-201ENST00000502376 214 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RNU6-445P-201ENST00000516949 107 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 DEFB122-202ENST00000569013 197 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.75□□□□□ -2.13
POLE3Q9NRF9 AC002044.1-201ENST00000606707 158 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.75□□□□□ -2.13
POLE3Q9NRF9 RMST_6.1-201ENST00000611980 203 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 AC120349.3-201ENST00000624377 529 ntBASIC1.75□□□□□ -2.13
POLE3Q9NRF9 LINC02555-201ENST00000563933 1951 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 MIR126-201ENST00000362291 85 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 RNU4-91P-201ENST00000364778 135 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 RNU6-1127P-201ENST00000384580 107 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 SNORA16.2-201ENST00000390991 127 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 RNU6-248P-201ENST00000410720 107 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 MTCO3P41-201ENST00000414801 328 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC078809.1-201ENST00000427601 140 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AL445567.1-201ENST00000439121 144 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC013470.1-201ENST00000453438 462 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 HMGN2P23-201ENST00000456759 269 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC092436.1-201ENST00000506450 503 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC091544.4-201ENST00000555268 342 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC012414.6-201ENST00000568241 401 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 MIR3923-201ENST00000579521 83 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AC023510.2-201ENST00000622162 746 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 AL390237.1-201ENST00000404226 1415 ntBASIC1.74□□□□□ -2.13
POLE3Q9NRF9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
POLE3Q9NRF9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 Y_RNA.332-201ENST00000365271 113 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 RNU6-827P-201ENST00000365553 106 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 RNU6-438P-201ENST00000365561 103 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC244505.5-201ENST00000443639 207 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 MTND1P27-201ENST00000451117 902 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 GMFBP1-201ENST00000467831 427 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 FAM206BP-201ENST00000510179 541 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 SNORA25.17-201ENST00000517184 124 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC022880.1-201ENST00000534017 973 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC103996.1-201ENST00000555468 102 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 AC005786.1-201ENST00000588553 154 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 VN1R107P-201ENST00000601784 209 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 ZNF680P1-201ENST00000436625 1469 ntBASIC1.73□□□□□ -2.13
POLE3Q9NRF9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
POLE3Q9NRF9 MTND4P14-201ENST00000435799 1354 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 MIR424-201ENST00000362227 98 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 U8.2-201ENST00000363156 134 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 Y_RNA.169-201ENST00000363745 96 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 RNU6-266P-201ENST00000364225 107 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 RNU6-606P-201ENST00000384721 111 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 RPS29P13-201ENST00000402041 169 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 MTCYBP2-201ENST00000407745 171 ntBASIC1.72□□□□□ -2.13
POLE3Q9NRF9 AL117339.3-201ENST00000418733 162 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms