Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RBM11P1-201ENST00000604951 799 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 MIR8076-201ENST00000611401 83 ntBASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.34□□□□□ -2.03
CHMP1AQ9HD42 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC096644.4-201ENST00000563417 2912 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC092268.1-201ENST00000342691 405 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 SNORD62.1-201ENST00000362541 86 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 RNU6-944P-201ENST00000364023 107 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP240-201ENST00000365355 128 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 RNU6-767P-201ENST00000384132 107 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 MIR521-1-201ENST00000384902 87 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL360182.1-201ENST00000397433 468 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 PCMTD1P1-201ENST00000455560 355 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 PPP1R2P5-201ENST00000457256 603 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 PMCHL2-203ENST00000457791 237 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 FTH1P2-201ENST00000466086 412 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 RPL7P49-201ENST00000471402 708 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 CKS1BP2-201ENST00000497342 240 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL117351.2-201ENST00000513571 157 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC046134.1-201ENST00000514454 666 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.682-201ENST00000516457 100 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 SNORA20.3-201ENST00000516880 132 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 MIR4801-201ENST00000582704 82 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 MIR3136-201ENST00000583498 78 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL670379.2-201ENST00000604983 252 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AL161423.1-201ENST00000613700 262 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC063943.3-201ENST00000615562 356 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 AC008121.3-201ENST00000618726 433 ntBASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
CHMP1AQ9HD42 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNU6-845P-201ENST00000362578 103 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP374-201ENST00000362939 125 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.123-201ENST00000363338 102 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNU6-142P-201ENST00000384019 107 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNU6-933P-201ENST00000384424 107 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 MIR517A-201ENST00000385001 87 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 MIR34B-201ENST00000385076 84 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 HMGB3P2-201ENST00000411913 584 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 PDCL2P1-201ENST00000419302 352 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC112220.1-201ENST00000434628 355 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC068781.1-201ENST00000488231 618 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC018868.1-201ENST00000491307 315 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC104564.1-201ENST00000493028 407 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC114801.2-201ENST00000503825 781 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 RNU7-30P-201ENST00000516835 62 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC243972.3-201ENST00000539655 198 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC007375.1-201ENST00000554513 578 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 AL022345.1-201ENST00000607292 135 ntBASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.32□□□□□ -2.04
CHMP1AQ9HD42 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 RNU6-790P-201ENST00000384479 105 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 RNU6-306P-201ENST00000384617 107 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MIR29B2-201ENST00000385055 81 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 CR769767.1-201ENST00000436337 346 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 BX510359.1-201ENST00000456973 237 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MTND5P5-201ENST00000503764 376 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 SNORA74D-201ENST00000516404 141 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 RN7SKP57-201ENST00000517248 293 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MRPS36P4-201ENST00000534436 298 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MIR4790-201ENST00000577799 79 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 AC019193.3-201ENST00000609144 554 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 AC022306.2-201ENST00000617563 647 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 U4atac.1-201ENST00000618345 95 ntBASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHMP1AQ9HD42 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms