Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNU6-85P-201ENST00000605989 107 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 MIR1302-1-201ENST00000637932 143 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 RNU6-37P-201ENST00000362692 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-11P-201ENST00000364234 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-25P-201ENST00000383873 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-1-201ENST00000383898 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.394-201ENST00000383942 103 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-48P-201ENST00000384161 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-36P-201ENST00000384172 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-4P-201ENST00000384205 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU4-52P-201ENST00000384209 138 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-5P-201ENST00000384238 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-3P-201ENST00000384314 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-16P-201ENST00000384385 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-15P-201ENST00000384534 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-658P-201ENST00000384606 106 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.535-201ENST00000384612 99 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-2-201ENST00000384627 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-29P-201ENST00000384637 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-9-201ENST00000384776 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-33P-201ENST00000384793 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RN7SKP158-201ENST00000410453 326 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RPL26P27-201ENST00000414397 437 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 BPY2DP-201ENST00000422208 265 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AL359672.1-201ENST00000442302 409 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RPL23AP7-203ENST00000449021 469 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 snoU109.2-201ENST00000459316 135 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 HMGB1P30-201ENST00000492455 606 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC243960.4-201ENST00000600532 288 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC009314.1-201ENST00000603871 304 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 RNU6-6P-201ENST00000606623 107 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AL022345.1-201ENST00000607292 135 ntBASIC2.63□□□□□ -1.99
UPF2Q9HAU5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
UPF2Q9HAU5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 OR56A5-201ENST00000340110 738 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RNU6-942P-201ENST00000363002 107 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RNA5SP138-201ENST00000365098 114 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RNU6-898P-201ENST00000365627 104 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RNU6-72P-201ENST00000384285 79 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 SNORD116-29-201ENST00000384516 83 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 MT-TD-201ENST00000387419 68 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 SNORD56-201ENST00000413522 71 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RPS15AP5-201ENST00000436276 388 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 HIGD1AP2-201ENST00000446367 280 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 GLYCAM1-201ENST00000546596 285 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 OR1M4P-201ENST00000589199 287 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 AC016727.1-205ENST00000605437 569 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 MIR6852-201ENST00000621699 66 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 U6.99-201ENST00000637524 83 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 AP000553.5-201ENST00000641933 54 ntBASIC2.62□□□□□ -1.99
UPF2Q9HAU5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
UPF2Q9HAU5 RNU6-1329P-201ENST00000365664 107 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 HMGB3P2-201ENST00000411913 584 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AF228730.4-201ENST00000421457 183 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC092427.1-202ENST00000430569 476 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 RNU7-187P-201ENST00000458985 68 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MTCO1P29-201ENST00000496868 288 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC087854.1-201ENST00000519706 414 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC104576.1-201ENST00000524225 88 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 COX6CP5-201ENST00000527162 228 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MIR4790-201ENST00000577799 79 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.61□□□□□ -1.99
UPF2Q9HAU5 AC100830.2-201ENST00000581636 240 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MIR5002-201ENST00000584713 97 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MIR6134-201ENST00000617606 109 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 MIR203B-201ENST00000636080 86 ntBASIC2.61□□□□□ -1.99
UPF2Q9HAU5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms