Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC090132.2-201ENST00000615881 347 ntBASIC4.54□□□□□ -1.68
EFCC1Q9HA90 AC027309.3-201ENST00000623419 351 ntBASIC4.54□□□□□ -1.68
EFCC1Q9HA90 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.54□□□□□ -1.68
EFCC1Q9HA90 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
EFCC1Q9HA90 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 UBE2WP1-201ENST00000362030 340 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 Y_RNA.343-201ENST00000365354 112 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 RNU6-898P-201ENST00000365627 104 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MIR10B-201ENST00000385011 110 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MIR325-201ENST00000385260 98 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 SNORA46.1-201ENST00000391069 153 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 U3.37-201ENST00000408528 213 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 RNU5E-9P-201ENST00000411164 104 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 EIF1AXP1-201ENST00000419267 435 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AC243964.1-201ENST00000441814 261 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 HMGB3P3-201ENST00000510526 400 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 Vault.1-201ENST00000516474 102 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AL391261.3-201ENST00000557194 520 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MIR3921-201ENST00000577308 85 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MIR4423-201ENST00000580922 80 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AC005176.2-201ENST00000596933 147 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 AL353743.1-202ENST00000431724 1695 ntBASIC4.53□□□□□ -1.68
EFCC1Q9HA90 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.53□□□□□ -1.68
EFCC1Q9HA90 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AP001486.2-201ENST00000561652 5113 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 Y_RNA.262-201ENST00000364641 102 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNU6-741P-201ENST00000383889 107 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNU6-1181P-201ENST00000384191 106 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNU6-281P-201ENST00000384212 103 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNU6-658P-201ENST00000384606 106 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNA5SP213-201ENST00000391031 106 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RNA5SP31-201ENST00000411144 127 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 BMS1P22-201ENST00000414726 313 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 SNRPEP9-201ENST00000436794 238 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 HMGN2P21-201ENST00000447764 270 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AL049873.1-201ENST00000480540 376 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 RPL23AP94-201ENST00000512518 302 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 MIR3186-201ENST00000577404 85 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 MIR3145-201ENST00000580727 82 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AC092628.2-201ENST00000622492 339 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 AC244205.2-202ENST00000635781 342 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.52□□□□□ -1.69
EFCC1Q9HA90 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EFCC1Q9HA90 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 ZNF204P-201ENST00000416749 2397 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 SNORD56.1-201ENST00000362913 68 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 U1.1-201ENST00000384101 164 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 RNU6-959P-201ENST00000384671 107 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 RNU6-131P-201ENST00000391144 107 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AC138623.1-201ENST00000418060 216 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 NDUFB4P7-201ENST00000423198 363 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 Z82210.1-201ENST00000440037 231 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 HMGB3P8-201ENST00000449709 577 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 SNORA40.9-201ENST00000515895 93 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 RNA5SP272-201ENST00000516095 111 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AC108706.1-201ENST00000611053 297 ntBASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFCC1Q9HA90 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms