Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.13□□□□□ -2.07
VIPAS39Q9H9C1 AC012493.3-201ENST00000604494 112 ntBASIC2.13□□□□□ -2.07
VIPAS39Q9H9C1 AC064836.2-201ENST00000609491 462 ntBASIC2.13□□□□□ -2.07
VIPAS39Q9H9C1 AC024614.3-201ENST00000637860 256 ntBASIC2.13□□□□□ -2.07
VIPAS39Q9H9C1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VIPAS39Q9H9C1 CENPCP1-201ENST00000533085 2578 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-451P-201ENST00000362921 107 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU1-23P-201ENST00000363361 144 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 Y_RNA.167-201ENST00000363735 109 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNY3P3-201ENST00000363816 102 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU1-91P-201ENST00000364746 163 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-332P-201ENST00000391193 108 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AL445529.1-201ENST00000398713 389 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 MRPS10P2-201ENST00000431226 381 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC013470.1-201ENST00000453438 462 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC091885.1-201ENST00000506658 268 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1069P-201ENST00000516612 133 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AP005597.4-201ENST00000526762 229 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC109635.3-201ENST00000529536 185 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 EIF4BP1-201ENST00000554881 351 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AL670379.2-201ENST00000604983 252 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC063943.3-201ENST00000615562 356 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC012640.5-201ENST00000623897 319 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC002543.1-201ENST00000299783 1954 ntBASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
VIPAS39Q9H9C1 AC027514.1-201ENST00000588561 1603 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC062016.1-201ENST00000355719 319 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 SNORA80A-201ENST00000363922 136 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-522P-201ENST00000364497 107 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RPL38P4-201ENST00000502376 214 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RNA5SP356-201ENST00000515972 94 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-586P-201ENST00000517265 104 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 MIR4319-201ENST00000577285 85 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC091135.1-201ENST00000585943 307 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 SNORD14A-201ENST00000606526 91 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 RMST_3.1-201ENST00000611651 109 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AL159153.1-201ENST00000619688 317 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC073869.6-201ENST00000640656 341 ntBASIC2.11□□□□□ -2.07
VIPAS39Q9H9C1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-43P-201ENST00000384302 107 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RN7SKP158-201ENST00000410453 326 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC124916.1-201ENST00000444020 547 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 CYP2C59P-201ENST00000457790 269 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AP001486.1-201ENST00000463339 476 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RPL30P1-201ENST00000488676 339 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC008628.2-201ENST00000502605 298 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC087854.1-201ENST00000519706 414 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 COPS8P3-201ENST00000526024 482 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 AC022202.1-201ENST00000613515 211 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.1□□□□□ -2.07
VIPAS39Q9H9C1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 RNY4P14-201ENST00000363656 96 ntBASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 RNA5SP240-201ENST00000365355 128 ntBASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 MIR634-201ENST00000385208 97 ntBASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.09□□□□□ -2.07
VIPAS39Q9H9C1 RPS29P13-201ENST00000402041 169 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms