Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NELFAQ9H3P2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RNA5SP124-201ENST00000362739 110 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RNU1-35P-201ENST00000362782 153 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 SNORD115-32-201ENST00000364079 82 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RNU6-198P-201ENST00000384258 104 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AC007969.2-201ENST00000441891 191 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 snoU13.6-201ENST00000458785 104 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AP002884.2-201ENST00000471647 395 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RPS27AP10-201ENST00000496103 208 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RNU6-1114P-201ENST00000516022 107 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AP006245.1-201ENST00000522549 120 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AC027288.2-201ENST00000553028 243 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AL020997.2-201ENST00000602607 184 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 U2.14-201ENST00000615943 113 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AL391261.4-201ENST00000616012 481 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NELFAQ9H3P2 AL353743.1-202ENST00000431724 1695 ntBASIC3.3□□□□□ -1.88
NELFAQ9H3P2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU4-90P-201ENST00000362773 141 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU5B-2P-201ENST00000363036 113 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.180-201ENST00000363867 113 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.319-201ENST00000365138 92 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 U8.10-201ENST00000384260 133 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU1-139P-201ENST00000391307 165 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 PTMAP5-201ENST00000393073 333 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AL033519.2-201ENST00000403958 392 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.793-201ENST00000411222 111 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU6-1001P-201ENST00000411265 100 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 GPM6BP3-201ENST00000442797 145 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AL138752.1-201ENST00000452964 351 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU7-23P-201ENST00000459465 62 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RN7SL542P-201ENST00000467147 294 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 RNU6-711P-201ENST00000517255 106 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 MIR5187-201ENST00000583479 76 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AL121772.2-201ENST00000614331 297 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 AC110491.1-201ENST00000562191 2010 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NELFAQ9H3P2 ZNF826P-207ENST00000622273 1910 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 GABRG2-229ENST00000641017 3628 ntBASIC3.29□□□□□ -1.88
NELFAQ9H3P2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 PWAR6-201ENST00000552334 4618 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNU6-142P-201ENST00000384019 107 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 SNORD63-201ENST00000384262 68 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNU6-886P-201ENST00000384319 105 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 MIR10B-201ENST00000385011 110 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNA5SP252-201ENST00000391131 119 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RNU6-651P-201ENST00000411040 105 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 SNORA57.3-201ENST00000411095 141 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AL159169.1-201ENST00000421119 127 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 RPL23AP95-201ENST00000426806 265 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AC096638.1-201ENST00000444678 216 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.28□□□□□ -1.88
NELFAQ9H3P2 AL136097.1-201ENST00000456945 913 ntBASIC3.28□□□□□ -1.88
NELFAQ9H3P2 Y_RNA.644-201ENST00000459006 113 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms