Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RN7SL52P-201ENST00000584271 284 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 AC022893.2-201ENST00000564832 3296 ntBASIC5.97□□□□□ -1.45
RNF39Q9H2S5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RNF39Q9H2S5 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.96□□□□□ -1.45
RNF39Q9H2S5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 SNORA58B-201ENST00000364259 136 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 U8.5-201ENST00000364528 136 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AC244098.2-201ENST00000422068 99 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 SRSF1P1-201ENST00000424058 520 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 TMEM183AP1-205ENST00000432739 290 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 RN7SL172P-201ENST00000460535 303 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AC106707.2-201ENST00000484182 374 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 RPS21P4-201ENST00000487122 248 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AC074140.1-201ENST00000621617 208 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF39Q9H2S5 AC068254.2-201ENST00000623938 3577 ntBASIC5.96□□□□□ -1.46
RNF39Q9H2S5 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 Y_RNA.98-201ENST00000363109 102 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 RNU1-19P-201ENST00000363306 165 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 RNA5SP339-201ENST00000390987 122 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 RNU2-7P-201ENST00000410794 178 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 Y_RNA.648-201ENST00000459455 110 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 SEM1P1-201ENST00000506694 209 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 AC090115.4-201ENST00000609970 188 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 AC109583.2-201ENST00000617367 129 ntBASIC5.95□□□□□ -1.46
RNF39Q9H2S5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF39Q9H2S5 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 RNU6-283P-201ENST00000364788 107 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 CD24P4-201ENST00000382840 243 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 MIR223-201ENST00000385204 110 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 RNU6-1321P-201ENST00000390905 107 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 RPL11P3-201ENST00000395256 523 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 AC025750.2-201ENST00000442609 450 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 RN7SL222P-201ENST00000476452 299 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 AP002004.2-201ENST00000531656 154 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 AC044860.2-201ENST00000561005 179 ntBASIC5.94□□□□□ -1.46
RNF39Q9H2S5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF39Q9H2S5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 AC034229.2-201ENST00000566945 2508 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 MIR937-201ENST00000401271 86 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-447P-201ENST00000410293 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-1118P-201ENST00000410382 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-1076P-201ENST00000410397 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-355P-201ENST00000410427 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-791P-201ENST00000410467 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-705P-201ENST00000410601 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-1100P-201ENST00000410691 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-860P-201ENST00000410860 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-1217P-201ENST00000411276 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 RNU6-785P-201ENST00000411324 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 MIR466-201ENST00000580653 84 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 MIR6798-201ENST00000612887 67 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 U6.90-201ENST00000614007 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 U6.70-201ENST00000620287 104 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 MIR6730-201ENST00000622213 67 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 OR56B2P-202ENST00000641377 2453 ntBASIC5.93□□□□□ -1.46
RNF39Q9H2S5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms