Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU4-10P-201ENST00000364383 140 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-1144P-201ENST00000384247 104 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 Z98941.1-201ENST00000407764 100 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AP000705.1-201ENST00000454567 350 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AC092991.1-201ENST00000477176 376 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 RN7SL271P-201ENST00000487601 295 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 RN7SKP122-201ENST00000515923 296 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-1183P-201ENST00000517054 60 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 MIR3138-201ENST00000585238 82 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AC020895.1-201ENST00000595362 272 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AC006254.2-201ENST00000603259 279 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AC136601.2-201ENST00000604356 474 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 AL078604.3-201ENST00000615580 211 ntBASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
NUCKS1Q9H1E3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RNU5F-3P-201ENST00000363767 117 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 Y_RNA.179-201ENST00000363844 90 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 SNORD37.2-201ENST00000391075 66 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-460P-201ENST00000391158 108 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RPL21P66-201ENST00000426566 466 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AC007969.2-201ENST00000441891 191 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AL357134.1-201ENST00000445848 426 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RPL23AP14-201ENST00000468281 468 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AC016632.1-201ENST00000503994 196 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RNA5SP76-201ENST00000516277 87 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 SNORA31.20-201ENST00000517111 133 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AC115990.1-201ENST00000526957 301 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 TRAV28-201ENST00000557548 323 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 LARP7P3-201ENST00000579888 337 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 MIR6830-201ENST00000636015 70 ntBASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUCKS1Q9H1E3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 MAPK10-253ENST00000641010 4072 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 SNORD56.1-201ENST00000362913 68 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-801P-201ENST00000364087 105 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RNU1-132P-201ENST00000364300 164 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 U3.15-201ENST00000365398 212 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-1310P-201ENST00000384153 107 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RPS12P23-201ENST00000419579 400 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RN7SKP179-201ENST00000516126 217 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-703P-201ENST00000516946 107 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 LINC00933-203ENST00000559812 219 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 MIR3939-201ENST00000582614 106 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 ARF4P1-201ENST00000605447 541 ntBASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUCKS1Q9H1E3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 RNU6-1285P-201ENST00000363480 105 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 MIR626-201ENST00000385032 94 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AL512633.1-201ENST00000399931 655 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 MIR1290-201ENST00000408735 78 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC006461.1-201ENST00000412637 326 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AL135790.2-201ENST00000437701 267 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 RN7SL385P-201ENST00000468873 276 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC010618.1-201ENST00000469924 477 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 MIR4697-201ENST00000582977 78 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC019159.1-201ENST00000605094 187 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC012531.5-201ENST00000611375 151 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AL391261.4-201ENST00000616012 481 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 AC013791.1-201ENST00000616619 62 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 ZNF962P-201ENST00000443465 3140 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 MTND5P32-201ENST00000560711 1802 ntBASIC4.48□□□□□ -1.69
NUCKS1Q9H1E3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms