Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
FOXP3Q9BZS1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.286-201ENST00000364813 102 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 RNU6-541P-201ENST00000384709 110 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 MIR10B-201ENST00000385011 110 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 AC073901.1-201ENST00000462471 408 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 AC107393.1-201ENST00000512403 346 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 RNU6-255P-201ENST00000516957 105 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 AC024405.2-202ENST00000532731 184 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 MIR5571-201ENST00000577998 113 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 Z83818.1-201ENST00000603584 150 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 SNORA51-201ENST00000606420 132 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 MIR8058-201ENST00000615737 89 ntBASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
FOXP3Q9BZS1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.319-201ENST00000365138 92 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 RNY4P28-201ENST00000365281 93 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 MIR888-201ENST00000401186 77 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.626-201ENST00000411288 95 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC074117.2-201ENST00000417130 397 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 HMGB3P8-201ENST00000449709 577 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC087499.8-201ENST00000578406 226 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 MIR3910-1-201ENST00000580936 111 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AL162424.1-201ENST00000602325 221 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC019159.1-201ENST00000605094 187 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC037487.3-201ENST00000606668 112 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 RMST_8.1-201ENST00000610287 165 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC005296.1-201ENST00000616145 209 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 AC092628.2-201ENST00000622492 339 ntBASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
FOXP3Q9BZS1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RNU6-600P-201ENST00000362524 99 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 SNORD56.1-201ENST00000362913 68 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RNU6-682P-201ENST00000363843 106 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RNU6-740P-201ENST00000364734 105 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RNU6-281P-201ENST00000384212 103 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 MIR7-3-201ENST00000384898 110 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RNU4-30P-201ENST00000410245 143 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 AC125238.1-201ENST00000448842 249 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.703-201ENST00000516846 111 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 AC012314.7-201ENST00000619693 93 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 AL034408.1-202ENST00000636088 415 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
FOXP3Q9BZS1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU6-884P-201ENST00000363889 107 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNA5SP42-201ENST00000364278 115 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU1-140P-201ENST00000365040 165 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU6-187P-201ENST00000384139 106 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.569-201ENST00000384749 103 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 MIR184-201ENST00000384962 84 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU6-159P-201ENST00000391080 106 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 WARS2P1-201ENST00000429678 537 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU1-95P-201ENST00000516357 160 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 Y_RNA.683-201ENST00000516508 93 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU1-128P-201ENST00000516704 160 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU6-567P-201ENST00000516746 107 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 RNU6-579P-201ENST00000516879 102 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 TGIF1P1-201ENST00000558095 802 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 MIR3133-201ENST00000583157 78 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 AC009093.8-201ENST00000641769 292 ntBASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXP3Q9BZS1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FOXP3Q9BZS1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms