Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC015914.2-201ENST00000618167 288 ntBASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 AL022401.1-201ENST00000619498 108 ntBASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 MIR8059-201ENST00000620427 81 ntBASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP3Q9BZ76 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AC139713.2-215ENST00000641428 5037 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-978P-201ENST00000364371 103 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.456-201ENST00000384232 111 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-440P-201ENST00000390882 105 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 RPL35AP21-201ENST00000437667 333 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AL445687.1-201ENST00000439946 251 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 HMGN2P21-201ENST00000447764 270 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 SNRPGP8-201ENST00000454064 226 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AP001486.1-201ENST00000463339 476 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AC016632.1-201ENST00000503994 196 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-970P-201ENST00000516312 107 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AL121772.2-201ENST00000614331 297 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AC009093.8-201ENST00000641769 292 ntBASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.38□□□□□ -1.71
CNTNAP3Q9BZ76 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-228P-201ENST00000362700 106 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-508P-201ENST00000363231 103 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-799P-201ENST00000363567 107 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-217P-201ENST00000384164 104 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 MIR518D-201ENST00000385014 87 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNA5SP225-201ENST00000410874 135 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC007969.2-201ENST00000441891 191 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC000111.2-201ENST00000448200 210 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RPS29P2-201ENST00000479278 136 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-1146P-201ENST00000516282 102 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.690-201ENST00000516603 95 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC131055.1-201ENST00000584626 316 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 FTX_3.1-201ENST00000610451 147 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AC000123.3-201ENST00000624029 4975 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 TLK1P1-201ENST00000456760 2440 ntBASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CNTNAP3Q9BZ76 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MIR367-201ENST00000362299 68 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RNU1-83P-201ENST00000363426 164 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-309P-201ENST00000364573 106 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 Y_RNA.341-201ENST00000365341 102 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 Z98749.2-208ENST00000381646 500 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-1264P-201ENST00000383891 107 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RNU6-136P-201ENST00000384663 107 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MIR659-201ENST00000384963 97 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MIR325-201ENST00000385260 98 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MIR1302-5-201ENST00000408164 150 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 MIR1278-201ENST00000408753 81 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RN7SKP61-201ENST00000410642 295 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RPL36AP10-201ENST00000421785 322 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RPL23AP14-201ENST00000468281 468 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RN7SL429P-201ENST00000479090 223 ntBASIC4.36□□□□□ -1.71
CNTNAP3Q9BZ76 RN7SL489P-201ENST00000486185 223 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms