Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 MTCO2P34-201ENST00000421994 607 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AL451074.3-201ENST00000437709 472 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 MTCO1P19-201ENST00000443487 500 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 SNORA25.17-201ENST00000517184 124 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 OR11H5P-201ENST00000554039 926 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 AC006362.1-201ENST00000567392 174 ntBASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CHMP4AQ9BY43 RNU6-1164P-201ENST00000364428 107 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 MTCYBP2-201ENST00000407745 171 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC009310.1-201ENST00000414414 451 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 BX510359.4-201ENST00000423750 193 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 MTCO2P11-201ENST00000431069 680 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 RPL31P3-201ENST00000458430 332 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 RPL23AP42-201ENST00000471152 471 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC027575.1-201ENST00000481064 460 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 RPL9P6-201ENST00000492764 598 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AL356057.1-201ENST00000533798 831 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC022254.1-201ENST00000567857 235 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 MIR3923-201ENST00000579521 83 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC073648.5-201ENST00000603502 305 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 APOOP1-201ENST00000604695 592 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC123912.5-201ENST00000605470 343 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC090582.1-201ENST00000636321 199 ntBASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP4AQ9BY43 AC005336.3-201ENST00000623833 2679 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 ZNF680P1-201ENST00000436625 1469 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 RNU6-266P-201ENST00000364225 107 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 RNU6-26P-201ENST00000383985 107 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 SNORA16.2-201ENST00000390991 127 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 OOSP1P1-201ENST00000423265 274 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AL133396.1-201ENST00000432048 687 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AL121601.2-201ENST00000438019 707 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 RNU1-131P-201ENST00000458943 161 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 RNU7-63P-201ENST00000459054 62 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AC002984.1-201ENST00000591692 448 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AC025449.1-201ENST00000603896 529 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AC063943.3-201ENST00000615562 356 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 AC097372.5-201ENST00000623665 376 ntBASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP4AQ9BY43 Y_RNA.359-201ENST00000365498 102 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 USP9YP27-201ENST00000418455 438 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 RPL23AP95-201ENST00000426806 265 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 AC010975.2-201ENST00000427781 588 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 WARS2P1-201ENST00000429678 537 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 AL118520.1-201ENST00000450770 291 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 AC145146.1-201ENST00000496370 254 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 RN7SKP219-201ENST00000516825 296 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 IGKV3-31-201ENST00000523109 329 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 AC021231.3-201ENST00000558497 370 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 RN7SKP299-201ENST00000606679 301 ntBASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CHMP4AQ9BY43 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 RNU6-23P-201ENST00000363283 107 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 SNORA48.1-201ENST00000390879 135 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 SNAP23P1-201ENST00000433229 246 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AC087884.1-201ENST00000469738 328 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AC092436.1-201ENST00000506450 503 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AK3P2-201ENST00000507976 429 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 RN7SKP298-201ENST00000515950 94 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 RNA5SP490-201ENST00000517141 136 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 AC087241.4-201ENST00000612441 480 ntBASIC2.76□□□□□ -1.97
CHMP4AQ9BY43 RNU4-15P-201ENST00000362613 141 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 RNU6-1303P-201ENST00000364841 107 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 RNU6-234P-201ENST00000365229 104 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 RNU6-1103P-201ENST00000384150 107 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 AL590135.1-201ENST00000422215 156 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 AC019205.3-201ENST00000424573 156 ntBASIC2.75□□□□□ -1.97
CHMP4AQ9BY43 SRIP2-201ENST00000428470 166 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms