Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PMCHL2-203ENST00000457791 237 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX3Q99909 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 RPL38P4-201ENST00000502376 214 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 Y_RNA.655-201ENST00000515919 96 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 RNU6-1069P-201ENST00000516612 133 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 RNU6-667P-201ENST00000517186 102 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AC016957.1-201ENST00000534895 309 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AC243972.3-201ENST00000539655 198 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AL157687.1-201ENST00000554853 619 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 MIR4435-1-201ENST00000582552 80 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.06□□□□□ -2.08
SSX3Q99909 AL121757.2-201ENST00000611223 313 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.06□□□□□ -2.08
SSX3Q99909 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.06□□□□□ -2.08
SSX3Q99909 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.06□□□□□ -2.08
SSX3Q99909 AP006437.1-201ENST00000641440 3685 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 ZNF702P-202ENST00000434269 1966 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SSX3Q99909 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SSX3Q99909 SNORD115-3-201ENST00000363100 82 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RNU6-1285P-201ENST00000363480 105 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 U3.12-201ENST00000364498 214 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RNU6-1141P-201ENST00000364520 107 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SSX3Q99909 SNORA46.1-201ENST00000391069 153 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 AL445529.1-201ENST00000398713 389 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RNA5SP508-201ENST00000411327 119 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.05□□□□□ -2.08
SSX3Q99909 AL590556.1-201ENST00000423231 483 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 AC096920.1-201ENST00000423991 241 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RPS15AP10-201ENST00000432472 382 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 ERLEC1P1-201ENST00000433806 578 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RPS3P1-201ENST00000456781 192 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RNU5F-2P-201ENST00000516066 82 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RN7SKP256-201ENST00000517201 314 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.05□□□□□ -2.08
SSX3Q99909 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.05□□□□□ -2.08
SSX3Q99909 AC026271.5-201ENST00000577873 130 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 RNU6-89P-201ENST00000606519 100 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 U4.3-201ENST00000621047 82 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 FER-210ENST00000628534 558 ntTSL 5 BASIC2.05□□□□□ -2.08
SSX3Q99909 AC243829.7-201ENST00000633081 225 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 MIR1321-201ENST00000637766 79 ntBASIC2.05□□□□□ -2.08
SSX3Q99909 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SSX3Q99909 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.05□□□□□ -2.08
SSX3Q99909 RNU6-908P-201ENST00000410160 94 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSX3Q99909 MTCO1P20-201ENST00000425366 358 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 SNAP23P1-201ENST00000433229 246 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 MTCO2P3-201ENST00000442543 421 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.04□□□□□ -2.08
SSX3Q99909 AC091435.1-201ENST00000505442 584 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 RN7SKP24-201ENST00000515888 284 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 AC025423.5-201ENST00000550230 219 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.04□□□□□ -2.08
SSX3Q99909 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.04□□□□□ -2.08
SSX3Q99909 MIR5692C1-201ENST00000585309 91 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 AC010525.2-201ENST00000590920 195 ntBASIC2.04□□□□□ -2.08
SSX3Q99909 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SSX3Q99909 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.04□□□□□ -2.08
SSX3Q99909 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SSX3Q99909 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSX3Q99909 Y_RNA.9-201ENST00000362354 101 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 RNU6-1090P-201ENST00000364065 94 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 RNA5SP37-201ENST00000365420 130 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 Y_RNA.402-201ENST00000383972 102 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 MIR518A2-201ENST00000384966 87 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 EIF4E2P1-201ENST00000393781 255 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 RNU2-32P-201ENST00000411193 191 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX3Q99909 USP9YP18-201ENST00000425912 695 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AC244670.1-201ENST00000436879 112 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AL137159.1-201ENST00000452808 512 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AC022447.4-201ENST00000504053 364 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX3Q99909 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX3Q99909 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 RNA5SP320-201ENST00000516263 124 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AP005597.4-201ENST00000526762 229 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AP000763.2-201ENST00000540641 163 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 NDUFA5P6-201ENST00000542110 379 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 HSPE1P4-201ENST00000550617 308 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AC078814.3-201ENST00000553036 491 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 ZNF519P2-201ENST00000557032 169 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AC009314.1-201ENST00000603871 304 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AL356157.2-201ENST00000605122 111 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.03□□□□□ -2.08
SSX3Q99909 AC063943.3-201ENST00000615562 356 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 AC005858.4-201ENST00000623191 700 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms