Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC243964.1-201ENST00000441814 261 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN2AQ99250 C1DP4-201ENST00000455429 424 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 RNU6-720P-201ENST00000516363 108 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AL021997.1-201ENST00000605757 193 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.73□□□□□ -2.13
SCN2AQ99250 RNU6-1085P-201ENST00000363576 107 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 RNU6-190P-201ENST00000384154 102 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 RNU6-1222P-201ENST00000384615 107 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 Y_RNA.559-201ENST00000384686 107 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 MIR147B-201ENST00000390185 80 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN2AQ99250 RNU6-373P-201ENST00000411247 98 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN2AQ99250 MTND1P23-201ENST00000416931 372 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.73□□□□□ -2.13
SCN2AQ99250 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SCN2AQ99250 AL121601.2-201ENST00000438019 707 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.73□□□□□ -2.13
SCN2AQ99250 U8.21-201ENST00000459536 136 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC008526.1-201ENST00000509149 338 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
SCN2AQ99250 AC087854.1-201ENST00000519706 414 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AP004607.1-201ENST00000524456 203 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AL137161.1-201ENST00000532231 390 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 LINC00933-203ENST00000559812 219 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 MIR4658-201ENST00000584344 65 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AC069294.1-201ENST00000608397 350 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 Z69720.2-201ENST00000624755 279 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 U4.7-201ENST00000638126 106 ntBASIC1.73□□□□□ -2.13
SCN2AQ99250 AL356292.1-201ENST00000283110 373 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 OR4G2P-201ENST00000328113 903 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN2AQ99250 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SCN2AQ99250 RNU6-384P-201ENST00000364900 104 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 RNU6-282P-201ENST00000365357 103 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 RNU6-996P-201ENST00000365438 107 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 RNU6-933P-201ENST00000384424 107 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 EDDM3CP-201ENST00000415977 425 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN2AQ99250 RPL23AP95-201ENST00000426806 265 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC108667.1-201ENST00000428618 249 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN2AQ99250 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.72□□□□□ -2.13
SCN2AQ99250 snoU13.18-201ENST00000459483 104 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC083798.1-201ENST00000472671 131 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN2AQ99250 Y_RNA.682-201ENST00000516457 100 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 RNU6-506P-201ENST00000516553 94 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 RN7SKP256-201ENST00000517201 314 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.72□□□□□ -2.13
SCN2AQ99250 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.72□□□□□ -2.13
SCN2AQ99250 VN1R107P-201ENST00000601784 209 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC068790.6-201ENST00000602558 258 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 AC096772.1-201ENST00000609146 564 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 MIR6895-201ENST00000613497 78 ntBASIC1.72□□□□□ -2.13
SCN2AQ99250 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SCN2AQ99250 Y_RNA.118-201ENST00000363300 101 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 SNORD113-7-201ENST00000363762 77 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 SNORA38-201ENST00000363946 132 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 Y_RNA.231-201ENST00000364358 102 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 BTF3L4P2-201ENST00000392798 346 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 SNORD56-201ENST00000413522 71 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 BTF3L4P1-201ENST00000413813 468 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RPS3AP44-201ENST00000425466 790 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 SNAP23P1-201ENST00000433229 246 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN2AQ99250 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN2AQ99250 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 SNORA31.18-201ENST00000517043 134 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 PSMA3P-201ENST00000555485 635 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN2AQ99250 MIR4498-201ENST00000577599 66 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 MTND1P15-201ENST00000579262 949 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC007684.1-201ENST00000609671 477 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC012640.5-201ENST00000623897 319 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AL596028.1-201ENST00000326971 197 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNU6-461P-201ENST00000364195 107 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNU6-266P-201ENST00000364225 107 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNU4-56P-201ENST00000364700 142 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 Y_RNA.378-201ENST00000365652 113 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 RNA5SP390-201ENST00000410191 113 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 UBE2V1P10-201ENST00000414685 269 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 ZNF885P-201ENST00000420174 1098 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.71□□□□□ -2.14
SCN2AQ99250 AC116655.1-201ENST00000508324 901 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC109635.3-201ENST00000529536 185 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 CYCSP26-201ENST00000534107 320 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AL157687.1-201ENST00000554853 619 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC103996.1-201ENST00000555468 102 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 ZNF519P2-201ENST00000557032 169 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AL138976.2-201ENST00000563989 694 ntBASIC1.71□□□□□ -2.14
SCN2AQ99250 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.71□□□□□ -2.14
SCN2AQ99250 MIR5583-1-201ENST00000580941 59 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms