Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MRPL35P3-201ENST00000421557 364 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC104308.1-201ENST00000454621 333 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC083798.1-201ENST00000472671 131 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNA5SP303-201ENST00000516192 130 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU6-1016P-201ENST00000516689 94 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNA5SP179-201ENST00000517284 121 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC138749.5-201ENST00000611461 208 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-12-201ENST00000362583 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-29-201ENST00000362834 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-9-201ENST00000362912 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-14-201ENST00000363090 81 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-19-201ENST00000363098 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-3-201ENST00000363100 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-18-201ENST00000363293 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-11-201ENST00000363616 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-5-201ENST00000363633 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU6-960P-201ENST00000364056 120 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-22-201ENST00000364456 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-17-201ENST00000364612 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU4-75P-201ENST00000364621 146 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-20-201ENST00000365099 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-43-201ENST00000365503 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SNORD115-36-201ENST00000365629 82 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU6-47P-201ENST00000383866 107 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 MIR1197-201ENST00000408818 88 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AL390729.2-201ENST00000416137 156 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AL139421.1-201ENST00000423010 169 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC068724.1-201ENST00000487100 792 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU6-976P-201ENST00000516086 111 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNA5SP24-201ENST00000516478 95 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC074051.3-201ENST00000570238 358 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 MIR548AB-201ENST00000584917 84 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AC015911.5-201ENST00000587076 451 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 Xist_exon4.1-201ENST00000615964 126 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.16□□□□□ -2.22
HMCN1Q96RW7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HMCN1Q96RW7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AL356292.1-201ENST00000283110 373 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RNU6-874P-201ENST00000362390 105 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RNU6-836P-201ENST00000362920 107 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RNU6-884P-201ENST00000363889 107 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 MIR520G-201ENST00000385064 90 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 MIR520H-201ENST00000385126 88 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 MIR300-201ENST00000401138 83 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RPS3AP3-201ENST00000411933 242 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RPL35AP21-201ENST00000437667 333 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RPS12P18-201ENST00000442381 270 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AL009048.1-201ENST00000450437 298 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 FO393415.2-201ENST00000480085 343 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AC090453.1-201ENST00000495560 436 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AC116337.1-201ENST00000509680 687 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 TXNP6-201ENST00000510190 310 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RNU6-68P-201ENST00000516576 104 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RN7SKP256-201ENST00000517201 314 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 DEFB131C-201ENST00000528817 165 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AP000907.2-201ENST00000530827 353 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AP002812.4-201ENST00000532139 286 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 MIR4301-201ENST00000577203 66 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 MIR4668-201ENST00000582284 70 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 AC013734.1-201ENST00000619329 111 ntBASIC1.15□□□□□ -2.22
HMCN1Q96RW7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
HMCN1Q96RW7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SNORD114-26-201ENST00000363543 72 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-263P-201ENST00000363811 107 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-670P-201ENST00000364312 104 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms