Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF861P-201ENST00000588126 639 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 HMGB1P24-202ENST00000615653 685 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 U4atac.1-201ENST00000618345 95 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 DUXAP9-208ENST00000622815 614 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
NR1H4Q96RI1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
NR1H4Q96RI1 Y_RNA.123-201ENST00000363338 102 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 RNU6-1283P-201ENST00000365314 105 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NR1H4Q96RI1 RNU6-1032P-201ENST00000384100 107 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 MIR449B-201ENST00000384995 97 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 RNU4-47P-201ENST00000410876 114 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 HMGB3P2-201ENST00000411913 584 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.55□□□□□ -2
NR1H4Q96RI1 AC006946.1-201ENST00000429106 328 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC098614.3-201ENST00000438957 440 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.55□□□□□ -2
NR1H4Q96RI1 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.55□□□□□ -2
NR1H4Q96RI1 PMCHL2-203ENST00000457791 237 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 RPS29P27-201ENST00000463711 170 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC116353.2-201ENST00000505332 712 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.55□□□□□ -2
NR1H4Q96RI1 SLC25A15P5-201ENST00000508033 253 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 SNORA48.11-201ENST00000517015 89 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.55□□□□□ -2
NR1H4Q96RI1 AC016256.1-201ENST00000547971 354 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC121758.2-201ENST00000553271 193 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.55□□□□□ -2
NR1H4Q96RI1 AC078795.3-201ENST00000602913 472 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 MIR3976-201ENST00000606807 139 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 uc_338.5-201ENST00000611839 155 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 MIR7975-201ENST00000619350 68 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 AC012314.7-201ENST00000619693 93 ntBASIC2.55□□□□□ -2
NR1H4Q96RI1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.55□□□□□ -2
NR1H4Q96RI1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.54□□□□□ -2
NR1H4Q96RI1 RNU6-845P-201ENST00000362578 103 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NR1H4Q96RI1 MIR95-201ENST00000385072 81 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 MIR561-201ENST00000385216 97 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.54□□□□□ -2
NR1H4Q96RI1 Z82205.1-201ENST00000428456 297 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 AC005326.1-201ENST00000429197 123 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AL353752.1-201ENST00000454946 260 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.54□□□□□ -2
NR1H4Q96RI1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.54□□□□□ -2
NR1H4Q96RI1 RNU7-30P-201ENST00000516835 62 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.54□□□□□ -2
NR1H4Q96RI1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC118273.2-201ENST00000532092 465 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.54□□□□□ -2
NR1H4Q96RI1 AL161423.1-201ENST00000613700 262 ntBASIC2.54□□□□□ -2
NR1H4Q96RI1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
NR1H4Q96RI1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
NR1H4Q96RI1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NR1H4Q96RI1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.54□□□□□ -2
NR1H4Q96RI1 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NR1H4Q96RI1 Y_RNA.166-201ENST00000363730 102 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 MIR7-3-201ENST00000384898 110 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC074085.1-201ENST00000413598 418 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC138393.2-201ENST00000414742 246 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 YME1L1P1-201ENST00000429435 297 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.53□□□□□ -2
NR1H4Q96RI1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.53□□□□□ -2
NR1H4Q96RI1 MTND1P17-201ENST00000448961 204 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC107399.1-201ENST00000451226 265 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC091874.1-201ENST00000511402 339 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 SNORA31.16-201ENST00000516773 139 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 SNORA20.3-201ENST00000516880 132 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.53□□□□□ -2
NR1H4Q96RI1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.53□□□□□ -2
NR1H4Q96RI1 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.53□□□□□ -2
NR1H4Q96RI1 MIR3923-201ENST00000579521 83 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.53□□□□□ -2
NR1H4Q96RI1 AC008739.3-201ENST00000603262 127 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 MIR7112-201ENST00000616126 65 ntBASIC2.53□□□□□ -2
NR1H4Q96RI1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NR1H4Q96RI1 RNU6-968P-201ENST00000384076 107 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 RNU6-1274P-201ENST00000384557 107 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 SNORA26.3-201ENST00000391119 136 ntBASIC2.52□□□□□ -2.01
NR1H4Q96RI1 RN7SKP158-201ENST00000410453 326 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms