Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNA5SP239-201ENST00000410218 129 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 SETP5-201ENST00000437270 562 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC243964.1-201ENST00000441814 261 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AL031659.1-201ENST00000447075 539 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC073901.1-201ENST00000462471 408 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC091021.1-201ENST00000468051 388 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC024153.1-201ENST00000603103 365 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AC024581.2-201ENST00000619986 252 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 AP000553.6-201ENST00000641242 118 ntBASIC4.19□□□□□ -1.74
SYNGAP1Q96PV0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.170-201ENST00000363746 110 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 SNORD115-32-201ENST00000364079 82 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-20P-201ENST00000384106 107 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 SNORA29-201ENST00000384183 140 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AC098831.1-201ENST00000440661 216 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AC117440.1-201ENST00000474107 571 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AP001025.1-201ENST00000486139 332 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 RPL7P47-201ENST00000497299 556 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 CYCSP39-201ENST00000565821 309 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 AC008749.1-201ENST00000597650 306 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.18□□□□□ -1.74
SYNGAP1Q96PV0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 AL359854.1-201ENST00000614203 1594 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 CEP170P1-201ENST00000502249 4587 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RNA5SP50-201ENST00000363731 107 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.304-201ENST00000365011 112 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.319-201ENST00000365138 92 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1035P-201ENST00000384477 107 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 MIR490-201ENST00000384865 128 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 HLFP1-201ENST00000402375 499 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RPL21P66-201ENST00000426566 466 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 RBMY2UP-201ENST00000453474 324 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 MRPL42P6-201ENST00000486397 371 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 MZT1P2-201ENST00000604387 248 ntBASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SYNGAP1Q96PV0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNU1-18P-201ENST00000363062 164 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNU1-33P-201ENST00000364249 162 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNU6-1175P-201ENST00000365200 107 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 MIR493-201ENST00000385254 89 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNU1-139P-201ENST00000391307 165 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 HMGN2P8-201ENST00000391458 268 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNA5SP120-201ENST00000410900 112 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AL512844.2-201ENST00000433990 593 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AL121890.1-201ENST00000435457 205 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 POLR2KP2-201ENST00000438155 177 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 GPM6BP3-201ENST00000442797 145 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 MRPS10P1-201ENST00000448483 130 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AC012308.1-201ENST00000451232 178 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RPL23AP3-201ENST00000453844 468 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 COX6CP14-201ENST00000469580 174 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RNY3P16-201ENST00000516338 101 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 Y_RNA.676-201ENST00000516393 96 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AC027288.2-201ENST00000553028 243 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RPL21P9-201ENST00000556149 474 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AC012493.2-201ENST00000595083 291 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 RPL12P50-201ENST00000603116 116 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
SYNGAP1Q96PV0 MIR7851-201ENST00000610611 160 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms