Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.4□□□□□ -2.34
CCDC115Q96NT0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
CCDC115Q96NT0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AL391994.1-201ENST00000254724 282 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 SNORD32B-201ENST00000364460 84 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 RNU1-133P-201ENST00000364867 167 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 RNU6-910P-201ENST00000390844 107 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 COX6CP10-201ENST00000416832 224 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 MRPS36P1-201ENST00000421291 307 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AC002429.1-201ENST00000437672 148 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AL158053.1-201ENST00000441503 453 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 ATP5J2P3-201ENST00000451550 258 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AL583843.1-201ENST00000456070 346 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 snoU109.2-201ENST00000459316 135 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 MIR449C-201ENST00000516047 92 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 RN7SKP49-201ENST00000516675 260 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AL121579.1-201ENST00000555129 305 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.4□□□□□ -2.35
CCDC115Q96NT0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC115Q96NT0 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CCDC115Q96NT0 RNU6-289P-201ENST00000364093 107 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 MIR10B-201ENST00000385011 110 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RNU6-278P-201ENST00000390945 109 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 Y_RNA.623-201ENST00000411128 95 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 ARL5AP1-201ENST00000418991 388 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RAB28P5-201ENST00000427490 651 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RNU6-914P-201ENST00000516749 109 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC091135.1-201ENST00000585943 307 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC098483.2-201ENST00000603158 454 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC026741.1-201ENST00000605892 482 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 AC023158.2-201ENST00000614876 543 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RMST_2.1-201ENST00000617263 136 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 MTND5P33-201ENST00000571250 1450 ntBASIC0.39□□□□□ -2.35
CCDC115Q96NT0 RNU6-1123P-201ENST00000362347 106 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 RNU6-862P-201ENST00000362804 105 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 FCF1P10-201ENST00000407590 479 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 BTF3L4P1-201ENST00000413813 468 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 MTCO1P21-201ENST00000416634 589 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC115Q96NT0 PAXBP1P1-201ENST00000449315 447 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 MTND1P3-201ENST00000484956 952 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC115Q96NT0 SNORA31.2-201ENST00000516019 134 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.38□□□□□ -2.35
CCDC115Q96NT0 AL590705.4-201ENST00000532209 134 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.38□□□□□ -2.35
CCDC115Q96NT0 AL442163.3-201ENST00000554110 156 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 AL136363.2-201ENST00000604173 851 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 RPL21P136-201ENST00000605378 396 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 SCARNA4-202ENST00000625402 129 ntBASIC0.38□□□□□ -2.35
CCDC115Q96NT0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 MTCO3P41-201ENST00000414801 328 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 TIMM9P2-201ENST00000419324 266 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AL627311.1-201ENST00000431514 115 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 SNRPEP8-201ENST00000442866 260 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 ZNF886P-201ENST00000450781 723 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 RPL39P38-201ENST00000467018 153 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 SUMO2P5-201ENST00000506790 245 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC067942.3-201ENST00000512025 362 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 RNU5F-2P-201ENST00000516066 82 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC023050.2-201ENST00000544968 387 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC104072.1-201ENST00000568817 668 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 MIR4709-201ENST00000577272 72 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.37□□□□□ -2.35
CCDC115Q96NT0 VN1R82P-201ENST00000601481 356 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AL353778.1-201ENST00000603149 408 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AL355816.2-201ENST00000610049 647 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC022709.1-201ENST00000615967 87 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 AC097460.3-201ENST00000623099 442 ntBASIC0.37□□□□□ -2.35
CCDC115Q96NT0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
CCDC115Q96NT0 Y_RNA.269-201ENST00000364685 89 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 MIR1305-201ENST00000408300 86 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 ELOCP9-201ENST00000418624 239 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 AC098934.3-201ENST00000430450 190 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 CETN4P-201ENST00000432407 469 ntBASIC0.36□□□□□ -2.35
CCDC115Q96NT0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
CCDC115Q96NT0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC115Q96NT0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC115Q96NT0 MTND2P30-201ENST00000456663 382 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms