Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR8063-201ENST00000621930 81 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AL359697.1-201ENST00000624879 587 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 RNU2-3P-201ENST00000410144 191 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 RNU6-233P-201ENST00000410845 141 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 RNA5SP100-201ENST00000410903 110 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 RNA5SP59-201ENST00000410922 110 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.57□□□□□ -2.5
CFAP54Q96N23 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 AC010809.3-201ENST00000621310 641 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.57□□□□□ -2.5
CFAP54Q96N23 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.57□□□□□ -2.5
CFAP54Q96N23 GTF2IP20-201ENST00000431663 360 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC092685.1-201ENST00000447960 1243 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC093303.1-201ENST00000514549 295 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC010376.1-201ENST00000522101 334 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 SUGT1P1-201ENST00000379514 476 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MIR196A1-201ENST00000388006 70 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MED13P1-201ENST00000428342 171 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 RNU6-917P-201ENST00000516294 104 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC027288.2-201ENST00000553028 243 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC112693.2-201ENST00000556538 232 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AF038458.1-201ENST00000588406 262 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC069294.1-201ENST00000608397 350 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 RNU6-251P-201ENST00000363235 104 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MTCO3P12-201ENST00000416718 547 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC093422.3-201ENST00000428506 305 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 SNORA31.17-201ENST00000516953 127 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC087481.2-201ENST00000565492 330 ntBASIC-0.58□□□□□ -2.5
CFAP54Q96N23 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.58□□□□□ -2.5
CFAP54Q96N23 RNU6-815P-201ENST00000384080 113 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 MTND4P32-201ENST00000437189 1237 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 ELOCP30-201ENST00000447108 299 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AL162395.1-201ENST00000457882 422 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AC113410.1-201ENST00000505029 247 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 HLA-S-202ENST00000425174 53 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 AL049870.4-201ENST00000555741 486 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.59□□□□□ -2.5
CFAP54Q96N23 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.59□□□□□ -2.5
CFAP54Q96N23 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 RNU6-269P-201ENST00000391077 97 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 MIR892B-201ENST00000401279 77 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL035398.1-201ENST00000430869 322 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC107297.1-201ENST00000459991 176 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AP001324.2-201ENST00000461163 319 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC067904.2-201ENST00000517322 1283 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 MTCYBP27-201ENST00000555160 670 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC005951.2-201ENST00000576282 495 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AP002906.1-201ENST00000603405 233 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC024940.5-201ENST00000622889 474 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.6□□□□□ -2.51
CFAP54Q96N23 MTCO3P7-201ENST00000510008 774 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL009028.1-201ENST00000604895 802 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AC013468.1-201ENST00000608680 598 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 AL121652.1-201ENST00000608851 448 ntBASIC-0.6□□□□□ -2.51
CFAP54Q96N23 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.61□□□□□ -2.51
CFAP54Q96N23 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.61□□□□□ -2.51
CFAP54Q96N23 RN7SKP164-201ENST00000516138 266 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC107304.1-201ENST00000604229 296 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC005094.1-201ENST00000440420 368 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 SNORA31.2-201ENST00000516019 134 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 RNY4-201ENST00000516507 96 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC023632.1-201ENST00000518463 375 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC015688.6-201ENST00000577737 104 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC117490.2-201ENST00000610042 594 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AL359854.1-201ENST00000614203 1594 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.61□□□□□ -2.51
CFAP54Q96N23 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms