Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AP004607.1-201ENST00000524456 203 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 CENPUP1-201ENST00000526649 1202 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC023050.3-201ENST00000541142 333 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC079598.5-201ENST00000547460 117 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC136619.2-201ENST00000563361 631 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 MIR3935-201ENST00000583472 104 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 MIR5692C1-201ENST00000585309 91 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC092747.3-201ENST00000603769 301 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 SNRPGP19-201ENST00000603826 189 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC012493.3-201ENST00000604494 112 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC068944.2-201ENST00000610373 403 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC084782.3-201ENST00000612282 578 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AC022202.1-201ENST00000613515 211 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 MIR1321-201ENST00000637766 79 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 AP006437.1-201ENST00000641440 3685 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
LINC00477Q96M19 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LINC00477Q96M19 ZNF702P-202ENST00000434269 1966 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNY3P3-201ENST00000363816 102 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNU4-12P-201ENST00000365233 139 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNA5SP240-201ENST00000365355 128 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 Y_RNA.450-201ENST00000384198 113 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNU6-332P-201ENST00000391193 108 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL033519.2-201ENST00000403958 392 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC027124.2-201ENST00000428249 105 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 TIMM9P3-201ENST00000428659 274 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC243964.1-201ENST00000441814 261 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL353752.1-201ENST00000454946 260 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 HMGN2P26-201ENST00000463169 339 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 MTCYBP18-201ENST00000501056 747 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNU5B-3P-201ENST00000516601 115 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 MTND4P7-201ENST00000523876 130 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC104576.1-201ENST00000524225 88 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 MTND1P35-201ENST00000526739 508 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 CR383656.8-201ENST00000549046 145 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC027807.1-201ENST00000559921 996 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 MIR4299-201ENST00000577899 72 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC090897.2-201ENST00000581715 130 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 RNU6-85P-201ENST00000605989 107 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 Z82243.1-201ENST00000609432 473 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 Y_RNA.783-201ENST00000613546 102 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 MIR219B-201ENST00000637023 88 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC068137.3-201ENST00000639191 341 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 AC073869.6-201ENST00000640656 341 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.51□□□□□ -2.17
LINC00477Q96M19 OR4G1P-203ENST00000641984 1631 ntBASIC1.51□□□□□ -2.17
LINC00477Q96M19 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 Y_RNA.89-201ENST00000363031 102 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RNU1-23P-201ENST00000363361 144 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 Y_RNA.231-201ENST00000364358 102 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RNU6-534P-201ENST00000364877 106 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RNU5E-7P-201ENST00000365290 117 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 SNORA67.3-201ENST00000384366 140 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 SNORD37.1-201ENST00000390968 65 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 HMGN2P39-201ENST00000398005 273 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AL023284.1-201ENST00000403956 276 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 SUMO2P12-201ENST00000405924 140 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RN7SKP32-201ENST00000410167 303 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RNA5SP338-201ENST00000410495 85 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC097463.2-201ENST00000421074 142 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 HMGN2P19-201ENST00000425149 265 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 AL031274.1-201ENST00000450334 232 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 HMGB3P17-201ENST00000504195 649 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 SNORA14.1-201ENST00000516113 141 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 RNU6-1069P-201ENST00000516612 133 ntBASIC1.5□□□□□ -2.17
LINC00477Q96M19 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.5□□□□□ -2.17
LINC00477Q96M19 IGKV3-31-201ENST00000523109 329 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms