Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SEH1LQ96EE3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNU4-42P-201ENST00000364738 142 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNU6-692P-201ENST00000384496 107 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.48□□□□□ -2.17
SEH1LQ96EE3 PIGFP2-201ENST00000421400 651 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SEH1LQ96EE3 USP9YP18-201ENST00000425912 695 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 IFNA20P-201ENST00000436840 528 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 MTND4P32-201ENST00000437189 1237 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RPS27AP8-201ENST00000452665 445 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 C1DP4-201ENST00000455429 424 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNA5SP182-201ENST00000516064 82 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 RNU6-295P-201ENST00000516901 104 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 MIR4524B-201ENST00000581569 115 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AC010928.2-201ENST00000588017 287 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AC011494.1-201ENST00000596454 237 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AC072046.2-201ENST00000618366 268 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 AC022418.1-201ENST00000624118 445 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 MIR1248-201ENST00000629190 106 ntBASIC1.48□□□□□ -2.17
SEH1LQ96EE3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 RNU6-336P-201ENST00000364891 107 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 RNU6-434P-201ENST00000384376 107 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 MIR29C-201ENST00000385231 88 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 RPL7P54-201ENST00000438336 674 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC243964.1-201ENST00000441814 261 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 SCARNA18-201ENST00000459004 134 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC104564.1-201ENST00000493028 407 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC145146.1-201ENST00000496370 254 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 MTND3P5-201ENST00000512798 333 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC117532.1-201ENST00000514638 323 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AL356057.1-201ENST00000533798 831 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC023050.3-201ENST00000541142 333 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC103987.3-201ENST00000582071 292 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 RSL24D1P11-201ENST00000591045 491 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC110760.3-201ENST00000598794 467 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC091805.2-201ENST00000603848 235 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC025449.1-201ENST00000603896 529 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AL022345.1-201ENST00000607292 135 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AL773524.1-201ENST00000614065 229 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 AC009161.2-201ENST00000624626 138 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.47□□□□□ -2.17
SEH1LQ96EE3 SNORD98-201ENST00000636377 67 ntBASIC1.47□□□□□ -2.17
SEH1LQ96EE3 RNU4-91P-201ENST00000364778 135 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 SNORA16.2-201ENST00000390991 127 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 MIR1283-2-201ENST00000408621 87 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AK3P2-201ENST00000507976 429 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 RNU2-69P-201ENST00000516061 100 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 RNU6-430P-201ENST00000517078 107 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AP003072.2-201ENST00000527756 676 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 TRAV32-201ENST00000553993 340 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AC103996.1-201ENST00000555468 102 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AL034555.1-201ENST00000604816 211 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.46□□□□□ -2.18
SEH1LQ96EE3 AC241585.2-209ENST00000638217 143 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 MTND4P14-201ENST00000435799 1354 ntBASIC1.46□□□□□ -2.18
SEH1LQ96EE3 RNU6-266P-201ENST00000364225 107 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 RNU6-827P-201ENST00000365553 106 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 RNU6-43P-201ENST00000384302 107 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 RNU6-482P-201ENST00000391068 107 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC068050.1-201ENST00000394891 380 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 SRIP3-201ENST00000413200 219 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC244636.1-201ENST00000421152 228 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AL590135.1-201ENST00000422215 156 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC019205.3-201ENST00000424573 156 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 HSPE1P21-201ENST00000438283 308 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC016700.2-201ENST00000446011 156 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 MTCO2P6-201ENST00000463134 685 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC015911.1-201ENST00000495111 156 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC115990.1-201ENST00000526957 301 ntBASIC1.45□□□□□ -2.18
SEH1LQ96EE3 AC022880.1-201ENST00000534017 973 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms