Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC107953.1-201ENST00000522216 297 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AC016957.1-201ENST00000534895 309 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AK6P1-201ENST00000540219 478 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 TPRKBP2-201ENST00000565969 475 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 MIR5092-201ENST00000583139 88 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AL356575.1-201ENST00000603008 283 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AF250324.2-201ENST00000608299 610 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 Y_RNA.516-201ENST00000384541 124 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AL117339.3-201ENST00000418733 162 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 USP9YP18-201ENST00000425912 695 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 SRIP2-201ENST00000428470 166 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 RPS15AP10-201ENST00000432472 382 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 MTND1P34-201ENST00000438556 671 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 RNU7-138P-201ENST00000459479 64 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 COPS8P3-201ENST00000526024 482 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC007375.1-201ENST00000554513 578 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AL512360.1-201ENST00000555346 234 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 VN1R80P-201ENST00000597126 338 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC092747.3-201ENST00000603769 301 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 SNRPGP17-201ENST00000603780 214 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP40Q96DI7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SNORD115-3-201ENST00000363100 82 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SNORA25.6-201ENST00000364121 118 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 DEFA7P-201ENST00000382676 285 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC245102.2-201ENST00000448956 180 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC013470.1-201ENST00000453438 462 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC018868.1-201ENST00000491307 315 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 RNU5F-2P-201ENST00000516066 82 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SNORA14.1-201ENST00000516113 141 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 RNU6-1038P-201ENST00000516516 104 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 RNU6-965P-201ENST00000516721 96 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC022616.8-201ENST00000533569 253 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 HSPE1P4-201ENST00000550617 308 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SNRPGP18-201ENST00000553000 214 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC090115.3-201ENST00000553218 849 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 MYL12BP1-201ENST00000569826 507 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 AC004492.1-201ENST00000607036 742 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SNORD98-201ENST00000636377 67 ntBASIC2.12□□□□□ -2.07
SNRNP40Q96DI7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 ZNF72P-201ENST00000425869 1908 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 RNU6-944P-201ENST00000364023 107 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 RNU6-743P-201ENST00000364151 106 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 Y_RNA.372-201ENST00000365599 102 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 RNU6-43P-201ENST00000384302 107 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 MIR514A2-201ENST00000385131 88 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 MIR514A3-201ENST00000385132 88 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 SNORA40.19-201ENST00000390846 128 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 RNU6-908P-201ENST00000410160 94 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 POLHP1-201ENST00000411806 470 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL590135.1-201ENST00000422215 156 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC019205.3-201ENST00000424573 156 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC244670.1-201ENST00000436879 112 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC016700.2-201ENST00000446011 156 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC015911.1-201ENST00000495111 156 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC022447.4-201ENST00000504053 364 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 RNA5SP82-201ENST00000516707 92 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 CENPUP1-201ENST00000526649 1202 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 OR11H5P-201ENST00000554039 926 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AL157687.1-201ENST00000554853 619 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 ZNF519P2-201ENST00000557032 169 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
SNRNP40Q96DI7 MIR3136-201ENST00000583498 78 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms