Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MTND4LP14-201ENST00000429447 288 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 USP9YP17-201ENST00000444617 696 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC109327.2-201ENST00000448339 378 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 AP006587.4-201ENST00000526053 529 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.35□□□□□ -2.35
TTC28Q96AY4 RRN3P3-201ENST00000549207 578 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 MIR548AX-201ENST00000580117 73 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 AC040896.1-201ENST00000613819 479 ntBASIC0.35□□□□□ -2.35
TTC28Q96AY4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TTC28Q96AY4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
TTC28Q96AY4 RNU6-28P-201ENST00000362378 107 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 SNORD65.1-201ENST00000390889 71 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 Y_RNA.582-201ENST00000391023 95 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 MTND4LP11-201ENST00000422184 280 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC020550.1-201ENST00000447385 163 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 CECR9-201ENST00000453421 199 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC134050.1-201ENST00000495088 933 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC012507.3-201ENST00000603556 477 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC144521.1-201ENST00000607148 956 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 AC068647.2-201ENST00000637380 353 ntBASIC0.34□□□□□ -2.36
TTC28Q96AY4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
TTC28Q96AY4 snoU2_19.1-201ENST00000362361 80 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-858P-201ENST00000362436 107 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-188P-201ENST00000364207 107 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 SNORD114-6-201ENST00000364393 72 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU1-36P-201ENST00000365130 165 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-1280P-201ENST00000365211 107 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-114P-201ENST00000384704 105 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 MTCO3P45-201ENST00000443036 613 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 PGBD4P5-201ENST00000445958 426 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 FCF1P6-201ENST00000456841 595 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 AL163195.1-201ENST00000496941 348 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 TMEM251P1-201ENST00000503717 318 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 MIR4789-201ENST00000577469 82 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 MIR3937-201ENST00000580135 106 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AL161798.1-201ENST00000604630 131 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC004832.4-201ENST00000608952 331 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AL355472.4-201ENST00000610233 626 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC084824.5-201ENST00000612009 413 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC010975.3-201ENST00000618727 978 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC009033.1-201ENST00000624279 431 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-944P-201ENST00000364023 107 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 Y_RNA.520-201ENST00000384556 102 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 MTND4P6-201ENST00000438297 472 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNFT1P2-201ENST00000443064 757 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TTC28Q96AY4 NDUFB4P10-201ENST00000452541 359 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 RNU6-667P-201ENST00000517186 102 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.33□□□□□ -2.36
TTC28Q96AY4 AC126365.2-201ENST00000580630 379 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 AL590240.4-201ENST00000616908 390 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.33□□□□□ -2.36
TTC28Q96AY4 Y_RNA.86-201ENST00000363020 111 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 SNORA25-201ENST00000384384 134 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RNU6-549P-201ENST00000384433 107 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RPL37P10-201ENST00000412884 288 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 RPS15AP10-201ENST00000432472 382 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC012308.1-201ENST00000451232 178 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 FABP5P15-201ENST00000453566 214 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RNA5SP269-201ENST00000459032 137 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 MTCO2P15-201ENST00000532655 656 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC087897.1-201ENST00000550134 156 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.32□□□□□ -2.36
TTC28Q96AY4 SNRPGP1-201ENST00000553864 222 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 MIR4499-201ENST00000584834 69 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 MIR4324-201ENST00000584846 72 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 RPL30P11-203ENST00000598995 310 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC073410.2-201ENST00000603240 332 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC018462.2-201ENST00000605375 395 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC008945.2-201ENST00000606056 604 ntBASIC0.32□□□□□ -2.36
TTC28Q96AY4 AC034229.4-201ENST00000607861 441 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms