Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC119751.7-201ENST00000600494 245 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
PTP4A1Q93096 AC090582.1-201ENST00000636321 199 ntBASIC2.02□□□□□ -2.09
PTP4A1Q93096 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PTP4A1Q93096 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PTP4A1Q93096 Y_RNA.255-201ENST00000364581 97 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 Y_RNA.582-201ENST00000391023 95 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 RNU7-138P-201ENST00000459479 64 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 Y_RNA.688-201ENST00000516565 95 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 HSPE1P18-201ENST00000517602 280 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 AP003034.1-201ENST00000534621 422 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AP002770.2-201ENST00000543613 532 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC021231.3-201ENST00000558497 370 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC006362.1-201ENST00000567392 174 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 MIR4672-201ENST00000583126 81 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 MIR5002-201ENST00000584713 97 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC087683.1-201ENST00000591187 441 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 MIR6852-201ENST00000621699 66 ntBASIC2.01□□□□□ -2.09
PTP4A1Q93096 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PTP4A1Q93096 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2□□□□□ -2.09
PTP4A1Q93096 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PTP4A1Q93096 CENPCP1-201ENST00000533085 2578 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 RNU6-23P-201ENST00000363283 107 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 RNU6-1164P-201ENST00000364428 107 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 SNORD32A-201ENST00000364805 84 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 RNU6-234P-201ENST00000365229 104 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 SNORA67.4-201ENST00000384688 142 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 CDK8P2-201ENST00000415020 547 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 RPL23AP95-201ENST00000426806 265 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AL121601.2-201ENST00000438019 707 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 MTCO1P19-201ENST00000443487 500 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AC108078.1-201ENST00000508073 725 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2□□□□□ -2.09
PTP4A1Q93096 AC110760.3-201ENST00000598794 467 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AL078605.1-201ENST00000603529 500 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 RMST_6.1-201ENST00000611980 203 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AC098657.3-201ENST00000620434 263 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AC009831.4-201ENST00000620744 325 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AL136221.1-201ENST00000621449 509 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 AL354685.2-201ENST00000448218 1447 ntBASIC2□□□□□ -2.09
PTP4A1Q93096 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTP4A1Q93096 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
PTP4A1Q93096 CBX3P1-201ENST00000325243 554 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 U3.9-201ENST00000363823 204 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 RNU4-55P-201ENST00000410731 137 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 MTCO2P19-201ENST00000427513 598 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 MTCO2P3-201ENST00000442543 421 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.99□□□□□ -2.09
PTP4A1Q93096 AL391646.1-201ENST00000603860 190 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 AC025811.1-201ENST00000604312 472 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 AP001836.1-201ENST00000604675 523 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 RPL17P51-201ENST00000605218 238 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 RN7SKP299-201ENST00000606679 301 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 AC073534.2-201ENST00000620377 381 ntBASIC1.99□□□□□ -2.09
PTP4A1Q93096 RNU6-82P-201ENST00000363970 107 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 Y_RNA.481-201ENST00000384373 102 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 Y_RNA.504-201ENST00000384481 104 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 SNORA26.3-201ENST00000391119 136 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.98□□□□□ -2.09
PTP4A1Q93096 AL035666.1-201ENST00000446195 348 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.98□□□□□ -2.09
PTP4A1Q93096 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC090115.3-201ENST00000553218 849 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC109446.1-201ENST00000566172 220 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.98□□□□□ -2.09
PTP4A1Q93096 MIR4713-201ENST00000582691 75 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 AC097520.1-201ENST00000624435 385 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 IGHVIII-44-202ENST00000636235 289 ntBASIC1.98□□□□□ -2.09
PTP4A1Q93096 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PTP4A1Q93096 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTP4A1Q93096 RNU6-438P-201ENST00000365561 103 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 SNORD116-9-201ENST00000384000 95 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 SNORD116-3-201ENST00000384287 95 ntBASIC1.97□□□□□ -2.09
PTP4A1Q93096 SNORD116-7-201ENST00000384404 95 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms