Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.68□□□□□ -1.98
NPIPB3Q92617 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPIPB3Q92617 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPB3Q92617 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPB3Q92617 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU6-874P-201ENST00000362390 105 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU4-15P-201ENST00000362613 141 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 Y_RNA.319-201ENST00000365138 92 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU6-541P-201ENST00000384709 110 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNA5SP201-201ENST00000410316 124 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RN7SKP220-201ENST00000410611 288 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 CYCSP35-201ENST00000451978 304 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU7-87P-201ENST00000459343 62 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC145146.1-201ENST00000496370 254 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 ANXA2P1-201ENST00000505539 926 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 RNU6-475P-201ENST00000516073 104 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 SNORA64.4-201ENST00000516632 81 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC006504.6-201ENST00000590142 199 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC022432.1-201ENST00000595739 310 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 MIR7851-201ENST00000610611 160 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC087588.2-201ENST00000617667 426 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 AC243829.7-201ENST00000633081 225 ntBASIC2.67□□□□□ -1.98
NPIPB3Q92617 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPIPB3Q92617 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NPIPB3Q92617 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPB3Q92617 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 Y_RNA.106-201ENST00000363189 100 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 SNORD115-8-201ENST00000363856 82 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 SNORD115-38-201ENST00000365037 82 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 RNU6-639P-201ENST00000384074 107 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 MIR628-201ENST00000385229 95 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 RNU6-1093P-201ENST00000391194 107 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 UBA52P6-201ENST00000399822 382 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 Y_RNA.592-201ENST00000410274 109 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 HMGB3P2-201ENST00000411913 584 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC004975.1-201ENST00000428733 208 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 USP9YP16-201ENST00000430287 407 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 USP9YP23-201ENST00000455085 407 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 RN7SL385P-201ENST00000468873 276 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC092185.1-201ENST00000491371 97 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 RN7SKP18-201ENST00000516005 275 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 RNU4-77P-201ENST00000516692 156 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 RNA5SP54-201ENST00000516951 92 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 CBX3P7-201ENST00000532876 502 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC136624.4-201ENST00000573044 370 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC090617.3-201ENST00000573670 475 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 PCGEM1.1-201ENST00000613431 131 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC040896.1-201ENST00000613819 479 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPB3Q92617 AC090517.3-201ENST00000625170 141 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 MIR4272-201ENST00000635924 64 ntBASIC2.66□□□□□ -1.98
NPIPB3Q92617 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPB3Q92617 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
NPIPB3Q92617 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NPIPB3Q92617 MTND5P16-201ENST00000460269 1703 ntBASIC2.65□□□□□ -1.98
NPIPB3Q92617 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NPIPB3Q92617 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NPIPB3Q92617 RNU1-72P-201ENST00000362976 153 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 Y_RNA.80-201ENST00000362996 102 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 U3.9-201ENST00000363823 204 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 SNORA46.1-201ENST00000391069 153 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC114482.1-201ENST00000418010 247 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 RNU7-169P-201ENST00000459456 61 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 RNU6-911P-201ENST00000516523 104 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 MIR2355-201ENST00000517199 87 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC104027.1-201ENST00000521887 300 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AC027288.2-201ENST00000553028 243 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 VN1R91P-201ENST00000594377 169 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 U2.1-201ENST00000618978 145 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.65□□□□□ -1.99
NPIPB3Q92617 MTND5P27-201ENST00000428871 1720 ntBASIC2.65□□□□□ -1.99
NPIPB3Q92617 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NPIPB3Q92617 AC005592.1-201ENST00000566527 1640 ntBASIC2.64□□□□□ -1.99
NPIPB3Q92617 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms