Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 ZNF826P-207ENST00000622273 1910 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 UBE2WP1-201ENST00000362030 340 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 SNORD9-201ENST00000362566 104 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 Y_RNA.127-201ENST00000363386 109 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNU6-151P-201ENST00000364158 107 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNU6-1280P-201ENST00000365211 107 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNU6-318P-201ENST00000384283 103 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNU6-21P-201ENST00000384710 107 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 MIR569-201ENST00000385228 96 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 MIR23A-201ENST00000385245 73 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNU2-52P-201ENST00000410680 190 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC009296.1-201ENST00000443146 155 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 HMGN2P16-201ENST00000456802 261 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC006445.2-201ENST00000510061 472 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 RNA5SP309-201ENST00000516670 106 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AL451007.1-201ENST00000595491 289 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC019159.1-201ENST00000605094 187 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 MIR7975-201ENST00000619350 68 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC048347.1-201ENST00000624621 427 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC110774.1-201ENST00000623567 2018 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC007656.2-201ENST00000624902 4547 ntBASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TMEM40Q8WWA1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 Y_RNA.71-201ENST00000362892 104 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RNU6-1255P-201ENST00000363434 112 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RNU1-140P-201ENST00000365040 165 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RNU6-1286P-201ENST00000383871 107 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RPS4XP3-201ENST00000398541 413 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RN7SKP53-201ENST00000411337 315 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC099548.1-201ENST00000421443 426 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 CYCSP4-201ENST00000429682 331 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC016700.2-201ENST00000446011 156 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 UQCRBP2-201ENST00000447827 297 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC007395.1-201ENST00000451333 677 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RPS4XP22-201ENST00000480755 780 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RPS29P20-201ENST00000489592 171 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RPL23AP75-201ENST00000491601 451 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 HMGB3P3-201ENST00000510526 400 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 SNORA70.18-201ENST00000516696 98 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC008749.1-201ENST00000597650 306 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 AC096577.2-201ENST00000611455 153 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TMEM40Q8WWA1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 ADAM3A-203ENST00000461344 2157 ntBASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 SNORA63.4-201ENST00000362763 126 ntBASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 RNVU1-14-201ENST00000384770 164 ntBASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 MIR218-2-201ENST00000385006 110 ntBASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 MIR34B-201ENST00000385076 84 ntBASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TMEM40Q8WWA1 PTMAP5-201ENST00000393073 333 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms