Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 ZNF299P-201ENST00000406845 1804 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 U3.26-201ENST00000391236 204 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL513475.1-201ENST00000406602 315 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 COTL1P1-201ENST00000422309 375 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 BX679664.1-201ENST00000434429 253 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC025750.2-201ENST00000442609 450 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL049830.2-201ENST00000480072 201 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 SCARNA24.2-201ENST00000516968 130 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 MRPS36P4-201ENST00000534436 298 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC093732.2-201ENST00000607950 274 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL353748.2-201ENST00000622148 471 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL137790.1-201ENST00000634283 177 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 U6.92-201ENST00000636464 89 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 LINC02555-201ENST00000563933 1951 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AC090740.1-201ENST00000623193 2262 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 DDX10P1-201ENST00000448545 1933 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 AL353746.1-201ENST00000566293 6881 ntBASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.68□□□□□ -1.82
SH3RF3Q8TEJ3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 MIR22-201ENST00000362190 85 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-1290P-201ENST00000362957 109 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AL591034.1-201ENST00000407447 340 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 RNU2-20P-201ENST00000410425 191 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 RNA5SP494-201ENST00000410653 129 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.626-201ENST00000411288 95 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC007098.1-201ENST00000420122 367 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 MTCO1P39-201ENST00000426148 480 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AL513124.1-201ENST00000450410 614 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 RPL37P6-201ENST00000460682 294 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC010186.2-204ENST00000537668 439 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC123912.5-201ENST00000605470 343 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AL110115.1-201ENST00000614396 364 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 PWAR6-201ENST00000552334 4618 ntBASIC3.67□□□□□ -1.82
SH3RF3Q8TEJ3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RNY4P28-201ENST00000365281 93 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 MIR591-201ENST00000385290 95 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC103783.1-201ENST00000520506 373 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 MIR4474-201ENST00000579189 78 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC098826.3-201ENST00000603823 466 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC011921.3-201ENST00000605540 361 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.66□□□□□ -1.82
SH3RF3Q8TEJ3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.65□□□□□ -1.82
SH3RF3Q8TEJ3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SH3RF3Q8TEJ3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.82
SH3RF3Q8TEJ3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 Y_RNA.439-201ENST00000384119 94 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-804P-201ENST00000384286 107 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-102P-201ENST00000384485 104 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-735P-201ENST00000410612 107 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RNU6-394P-201ENST00000410735 107 ntBASIC3.65□□□□□ -1.83
SH3RF3Q8TEJ3 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms