Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL360271.2-201ENST00000447710 161 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 RNU1-86P-201ENST00000516108 154 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 RNU7-51P-201ENST00000516560 62 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 RNU1-107P-201ENST00000516617 154 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AC019176.1-201ENST00000518519 225 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 TRAV32-201ENST00000553993 340 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AL158032.1-201ENST00000605401 106 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AL355802.3-201ENST00000607571 545 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AC131159.1-201ENST00000621854 213 ntBASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
CCDC112Q8NEF3 AC073343.1-201ENST00000328239 651 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 Y_RNA.302-201ENST00000364997 102 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 SNORA18.2-201ENST00000383865 132 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU6-636P-201ENST00000384598 107 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU6-296P-201ENST00000384608 107 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC006026.2-201ENST00000457376 180 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC130509.1-201ENST00000464158 433 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC108078.1-201ENST00000508073 725 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU6-123P-201ENST00000516163 102 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 MIR151B-201ENST00000584249 96 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC091135.1-201ENST00000585943 307 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC005786.1-201ENST00000588553 154 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU4-5P-201ENST00000607255 135 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC018645.2-201ENST00000609151 472 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC012409.4-201ENST00000612923 249 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC130454.1-201ENST00000622948 401 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 AC103706.2-201ENST00000638080 240 ntBASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC112Q8NEF3 RNU4-1-201ENST00000363925 141 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 SNORD32B-201ENST00000364460 84 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MIR520E-201ENST00000384867 87 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MTND4P20-201ENST00000424125 869 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC139712.2-201ENST00000424302 339 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MTND5P2-201ENST00000442927 1142 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MTATP6P14-201ENST00000455189 673 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 snoU109.3-201ENST00000459477 145 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MTND5P9-201ENST00000503854 1755 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MTND2P33-201ENST00000506452 1031 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 RNU5F-2P-201ENST00000516066 82 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 SNORA31.16-201ENST00000516773 139 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 RNA5SP337-201ENST00000517007 109 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 CENPUP1-201ENST00000526649 1202 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 ADI1P3-201ENST00000549509 470 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 ZNF519P3-201ENST00000557158 1032 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AL157392.4-201ENST00000609756 345 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 AL049777.1-201ENST00000622740 518 ntBASIC1.02□□□□□ -2.25
CCDC112Q8NEF3 LINC02555-201ENST00000563933 1951 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 SNORD56.2-201ENST00000363242 71 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RNU6-26P-201ENST00000383985 107 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RNU6-83P-201ENST00000384568 112 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 MIR613-201ENST00000385248 95 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 USP9YP17-201ENST00000444617 696 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 MTND1P18-201ENST00000448191 573 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 SNRPFP3-201ENST00000457792 225 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RNU1-131P-201ENST00000458943 161 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RPS29P1-201ENST00000465274 159 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AP000797.1-201ENST00000478870 387 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RPL26P26-201ENST00000480251 434 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AC034244.1-201ENST00000507687 207 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC112Q8NEF3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms