Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC092268.1-201ENST00000342691 405 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 Y_RNA.84-201ENST00000363011 104 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 snoU2_19.2-201ENST00000363024 80 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 Y_RNA.257-201ENST00000364596 102 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 MIR215-201ENST00000384858 110 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 SNORA48.8-201ENST00000391324 134 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 UBA52P6-201ENST00000399822 382 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AL079342.1-201ENST00000401460 267 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 RNU2-25P-201ENST00000411041 191 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC139712.2-201ENST00000424302 339 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 OR4C10P-201ENST00000434991 931 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC012308.1-201ENST00000451232 178 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AP000705.1-201ENST00000454567 350 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 snoU13.6-201ENST00000458785 104 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC107222.1-201ENST00000510899 637 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 Y_RNA.713-201ENST00000517013 96 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 MIR3128-201ENST00000581957 66 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC073410.2-201ENST00000603240 332 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AL359198.2-201ENST00000611836 194 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC011476.5-201ENST00000615594 130 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AP001282.2-201ENST00000616149 309 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC078938.1-201ENST00000620993 318 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
HIPK4Q8NE63 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HIPK4Q8NE63 MIR372-201ENST00000362225 67 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.60-201ENST00000362831 98 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.319-201ENST00000365138 92 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNA5SP283-201ENST00000365604 119 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 MIR10B-201ENST00000385011 110 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNU6-1093P-201ENST00000391194 107 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNU6-1203P-201ENST00000410703 110 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 PTGES3P4-201ENST00000426243 356 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AL591419.1-201ENST00000427423 339 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RPS15AP7-201ENST00000439294 405 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC096638.1-201ENST00000444678 216 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 RNU6-579P-201ENST00000516879 102 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC026333.2-201ENST00000542164 106 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC021231.3-201ENST00000558497 370 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC023824.2-201ENST00000566185 400 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 MIR4659A-201ENST00000580269 81 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AL078605.1-201ENST00000603529 500 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 MIR376A1-201ENST00000616574 68 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC137590.2-201ENST00000619709 240 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 SDR42E1P4-201ENST00000620894 481 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 LINC02555-201ENST00000563933 1951 ntBASIC3.4□□□□□ -1.87
HIPK4Q8NE63 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.4□□□□□ -1.87
HIPK4Q8NE63 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNU6-212P-201ENST00000362642 104 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNA5SP361-201ENST00000362686 118 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.143-201ENST00000363520 106 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNU6-879P-201ENST00000364328 108 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RPL39P38-201ENST00000467018 153 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNU5B-3P-201ENST00000516601 115 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 SNORA31.16-201ENST00000516773 139 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 RNU6-58P-201ENST00000517143 103 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 UBL5P4-201ENST00000562584 236 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 AC012433.1-201ENST00000588916 398 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 Y_RNA.772-201ENST00000606692 102 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 MIR6875-201ENST00000617506 72 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
HIPK4Q8NE63 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HIPK4Q8NE63 MTND5P6-201ENST00000422338 1798 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms