Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CUL1P1-201ENST00000509510 2425 ntBASIC3.14□□□□□ -1.91
CPEB3Q8NE35 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPEB3Q8NE35 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPEB3Q8NE35 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CPEB3Q8NE35 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SNORD9-201ENST00000362566 104 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RNU6-283P-201ENST00000364788 107 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RNU6-937P-201ENST00000384325 106 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.541-201ENST00000384640 113 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 MIR153-2-201ENST00000385225 87 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SNORA48.7-201ENST00000391302 135 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RNU1-139P-201ENST00000391307 165 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SNORD58.1-201ENST00000391313 66 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AL603910.2-201ENST00000407268 136 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SNORA11-201ENST00000408789 128 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RNU2-20P-201ENST00000410425 191 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RNU6-1245P-201ENST00000411130 106 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 RN7SKP53-201ENST00000411337 315 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC016700.2-201ENST00000446011 156 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 SNORA84-201ENST00000459229 133 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC016256.1-201ENST00000547971 354 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC019159.1-201ENST00000605094 187 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AL356157.2-201ENST00000605122 111 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AC039056.2-201ENST00000622261 511 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AP003355.3-201ENST00000623465 114 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AL450472.1-202ENST00000637286 180 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 AF117829.1-206ENST00000621883 3802 ntBASIC3.13□□□□□ -1.91
CPEB3Q8NE35 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CPEB3Q8NE35 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AL353743.1-202ENST00000431724 1695 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 Y_RNA.352-201ENST00000365439 102 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 SNORA5A-201ENST00000384111 134 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 U8.10-201ENST00000384260 133 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 MIR449B-201ENST00000384995 97 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 HMGN2P10-201ENST00000448085 265 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 SSXP4-201ENST00000451349 245 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 SUMO1P2-201ENST00000452524 304 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AL139109.1-201ENST00000455491 297 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AC084357.1-201ENST00000473404 255 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 RNU5B-3P-201ENST00000516601 115 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 SNORA70.18-201ENST00000516696 98 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 SNORA31.23-201ENST00000517219 133 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AC027288.2-201ENST00000553028 243 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 MIR5571-201ENST00000577998 113 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 MIR3158-1-201ENST00000583596 81 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AL365434.2-201ENST00000607979 234 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 AC012442.3-202ENST00000636742 206 ntBASIC3.12□□□□□ -1.91
CPEB3Q8NE35 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CPEB3Q8NE35 FAM35BP-202ENST00000497389 3337 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 SNORD113-8-201ENST00000363497 74 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNY1-201ENST00000364228 113 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNU6-843P-201ENST00000384454 104 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNU6-102P-201ENST00000384485 104 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 DBIP2-201ENST00000419076 262 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC099548.1-201ENST00000421443 426 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 MTND5P15-201ENST00000434246 349 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RPS15AP7-201ENST00000439294 405 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 MED28P2-201ENST00000475771 317 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNU6-496P-201ENST00000516145 99 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNU6-581P-201ENST00000516214 105 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNU6-579P-201ENST00000516879 102 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC026403.1-201ENST00000518938 295 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC130289.1-201ENST00000577321 73 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC024220.1-201ENST00000603675 484 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 RNVU1-4-201ENST00000612985 164 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AC006133.1-201ENST00000617106 264 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
CPEB3Q8NE35 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CPEB3Q8NE35 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms