Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AL031274.1-201ENST00000450334 232 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 RNU7-180P-201ENST00000459240 63 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 HMGB3P17-201ENST00000504195 649 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 AC010486.3-201ENST00000511602 785 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 AL158211.1-201ENST00000566763 763 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 MIR3122-201ENST00000577243 73 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 BNIP3P25-201ENST00000596023 559 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 AL022345.1-201ENST00000607292 135 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 RMST_6.1-201ENST00000611980 203 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 ELL2P3-201ENST00000457883 1602 ntBASIC2.06□□□□□ -2.08
CCDC170Q8IYT3 RNU6-996P-201ENST00000365438 107 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 RNU11-3P-201ENST00000391111 133 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AL356432.1-201ENST00000405809 419 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 VN1R108P-201ENST00000431580 830 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AK3P2-201ENST00000507976 429 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 RN7SKP298-201ENST00000515950 94 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
CCDC170Q8IYT3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RNU6-234P-201ENST00000365229 104 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RNU6-827P-201ENST00000365553 106 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RNU6-160P-201ENST00000384591 107 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RPL17P50-201ENST00000396131 546 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AL590135.1-201ENST00000422215 156 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC019205.3-201ENST00000424573 156 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 MTCO2P19-201ENST00000427513 598 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AL133396.1-201ENST00000432048 687 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC016700.2-201ENST00000446011 156 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC073415.1-201ENST00000449240 153 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC015911.1-201ENST00000495111 156 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC016632.1-201ENST00000503994 196 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC026407.1-201ENST00000518369 204 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 HSPE1P4-201ENST00000550617 308 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC004223.2-201ENST00000590309 544 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AL391646.1-201ENST00000603860 190 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.15-201ENST00000611544 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.16-201ENST00000613119 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.12-201ENST00000613778 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.20-201ENST00000613956 192 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.9-201ENST00000615427 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.11-201ENST00000616345 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.2-201ENST00000616535 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.3-201ENST00000617785 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.19-201ENST00000618602 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 RNU2-1-201ENST00000618664 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.6-201ENST00000619225 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.5-201ENST00000619465 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 U2.10-201ENST00000620268 191 ntBASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC170Q8IYT3 AC233981.2-201ENST00000611524 1614 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 Y_RNA.553-201ENST00000384670 102 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 RN7SKP32-201ENST00000410167 303 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 AL135786.1-201ENST00000415892 214 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 SNRPGP7-201ENST00000469016 106 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 AC090115.3-201ENST00000553218 849 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 uc_338.34-201ENST00000617467 174 ntBASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC170Q8IYT3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC170Q8IYT3 SNORA16.1-201ENST00000364597 132 ntBASIC2.02□□□□□ -2.09
CCDC170Q8IYT3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CCDC170Q8IYT3 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms