Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC013470.1-201ENST00000453438 462 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU7-138P-201ENST00000459479 64 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AK3P2-201ENST00000507976 429 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC093249.1-201ENST00000567049 203 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC107304.1-201ENST00000604229 296 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL355297.2-201ENST00000604792 129 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC092807.2-201ENST00000609367 243 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 MIR1321-201ENST00000637766 79 ntBASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
C9orf40Q8IXQ3 MTND4P1-201ENST00000457501 1466 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 OR4G1P-203ENST00000641984 1631 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.231-201ENST00000364358 102 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-827P-201ENST00000365553 106 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1215P-201ENST00000384441 102 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.516-201ENST00000384541 124 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 MTCO1P20-201ENST00000425366 358 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC243964.1-201ENST00000441814 261 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 USP9YP8-201ENST00000441913 500 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC124916.1-201ENST00000444020 547 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 snoU13.14-201ENST00000459372 104 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AL121594.1-201ENST00000475906 575 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AP005902.1-201ENST00000521358 186 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 AC103996.1-201ENST00000555468 102 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 TPRKBP2-201ENST00000565969 475 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 DISC2.1-201ENST00000612827 205 ntBASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
C9orf40Q8IXQ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 SNORA6-201ENST00000384033 151 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 RNU1-52P-201ENST00000384190 164 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.554-201ENST00000384672 102 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 RPS29P13-201ENST00000402041 169 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 IFNA11P-201ENST00000446352 526 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AL513124.1-201ENST00000450410 614 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 HSPE1P18-201ENST00000517602 280 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC109635.3-201ENST00000529536 185 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 ZNF519P2-201ENST00000557032 169 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 MIR4298-201ENST00000584380 73 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC091135.1-201ENST00000585943 307 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 BNIP3P16-201ENST00000589779 534 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC010525.2-201ENST00000590920 195 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 RNU6-89P-201ENST00000606519 100 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AL121757.2-201ENST00000611223 313 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AC008121.3-201ENST00000618726 433 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 AL159153.1-201ENST00000619688 317 ntBASIC1.88□□□□□ -2.11
C9orf40Q8IXQ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.9-201ENST00000362354 101 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 U3.13-201ENST00000364804 214 ntBASIC1.87□□□□□ -2.11
C9orf40Q8IXQ3 Y_RNA.402-201ENST00000383972 102 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms